DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and Pxdn

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:XP_006515268.1 Gene:Pxdn / 69675 MGIID:1916925 Length:1503 Species:Mus musculus


Alignment Length:716 Identity:229/716 - (31%)
Similarity:341/716 - (47%) Gaps:107/716 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SSGYHIVHNQPQSSFPNYHGFSYLQGSAPYVIGNS------------------------LPTSPA 65
            |:..|:..::|:|  ||.....:.....||.:|.:                        |..:..
Mouse   666 STRTHLFDSRPRS--PNDLLALFRYPRDPYTVGQARAGEIFERTLQLIQEHVQHGLMVDLNGTSY 728

  Fly    66 PQNPFSSPASPPVSAYGYSFPTAGRVSCAAPPAV------CEKTAYRTLDGSCNHLEQPGLGVAN 124
            ..|...||.        |....|....|.|...|      |....|||.||:||:|:.|..|.:.
Mouse   729 HYNDLVSPQ--------YLSLIANLSGCTAHRRVNNCSDMCFHQKYRTHDGTCNNLQHPMWGASL 785

  Fly   125 SKYGRLLTPKYADGISAP-----TRSVTGDELPSARLVSLVAFGEQDV-PDPEFTLHNMQWGQIM 183
            :.:.|||...|.:|.:.|     .|...|..||..||||....|.:.: ||.:||...|||||.:
Mouse   786 TAFERLLKAVYENGFNTPRGINSQRQYNGHVLPMPRLVSTTLIGTEVITPDEQFTHMLMQWGQFL 850

  Fly   184 THDM-SMQAGGTQSK----KHPTRCCTDDGRLIGLDTAHKTCFAIIVPPHDPAYSQVGTECLNFV 243
            .||: |.....:|::    :|.:..|::|          ..||::::||:||.. :.|..|:.||
Mouse   851 DHDLDSTVVALSQARFSDGQHCSSVCSND----------PPCFSVMIPPNDPRV-RSGARCMFFV 904

  Fly   244 RT-------LTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSDIREFQGGRMI----VE 297
            |:       :|....|..|   |.||:..:|||:|.|.|||::..:...||:....|.:    :.
Mouse   905 RSSPVCGSGMTSLLMNSVY---PREQINQLTSYIDASNVYGSTDHEARSIRDLASHRGLLRQGIV 966

  Fly   298 ERNGAKWLPLSRNVTGDC--DAVDASEVCYRSGDVRVNQNPGLAILQTILLREHNRIADALSALN 360
            :|:|...||.:.....:|  |..::...|:.:||.|.|:..||..:.|:..|||||||..|..||
Mouse   967 QRSGKPLLPFATGPPTECMRDENESPIPCFLAGDHRANEQLGLTSMHTLWFREHNRIAAELLKLN 1031

  Fly   361 PHYDDRTLFQEARKINIAQYQQISYYEWLPIFLG--GENMLKNRLIYKAPSGSYINDFDPNIDPS 423
            ||:|..|::.|.|||..|:.|.|:|..|||..||  |..||          |.| ..:||:::..
Mouse  1032 PHWDGDTVYHETRKIVGAEIQHITYRHWLPKILGEVGMKML----------GEY-RGYDPSVNAG 1085

  Fly   424 VLNEHATAAFRYFHSQIEGRLDLLSELRQVL--GSLTLSDWFNRPGIIEVGDNFDSLTR------ 480
            :.|..||||||:.|:.|...|..|.|..:.:  |.:.|...|..|..|......|.|.|      
Mouse  1086 IFNAFATAAFRFGHTLINPLLYRLDENFEPIPQGHVPLHKAFFSPFRIVNEGGIDPLLRGLFGVA 1150

  Fly   481 GHATQPEELTDINFDRQIKHFLFRRNMPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWE 545
            |....|.:|    .:.::...||........||.:::|||.||||:..|:|.|.:|.|..|:::|
Mouse  1151 GKMRIPSQL----LNTELTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFE 1211

  Fly   546 GY-GDLISPPILEKLKSLYPSHEDVDLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFF 609
            .. .::.||.|.|||:.||.|..::||.....:|..|.|:..|||.:|:|:.||.|.|.|||.::
Mouse  1212 DLKNEIKSPVIREKLQRLYGSTLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRLRDGDRLWY 1276

  Fly   610 ENGDKLTGFTPDQLEELRKASMARLLCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWI 674
            ||...   |:|.||.:|::.|:||:||||.::|:.:|.:.||.....:....|.:||:|||..|.
Mouse  1277 ENPGV---FSPAQLTQLKQTSLARILCDNSDNITRVQQDVFRVAEFPHGYSSCEDIPRVDLRVWQ 1338

  Fly   675 D 675
            |
Mouse  1339 D 1339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 198/572 (35%)
peroxinectin_like 260..638 CDD:188655 140/394 (36%)
PxdnXP_006515268.1 leucine-rich repeat 94..112 CDD:275380
leucine-rich repeat 113..127 CDD:275378
LRR_8 115..171 CDD:338972
LRR_8 160..219 CDD:338972
leucine-rich repeat 161..184 CDD:275378
leucine-rich repeat 185..208 CDD:275378
leucine-rich repeat 209..221 CDD:275378
TPKR_C2 217..268 CDD:387596
I-set 271..358 CDD:369462
I-set 367..454 CDD:369462
Ig3_Peroxidasin 471..544 CDD:143222
Ig4_Peroxidasin 567..635 CDD:143223
peroxidasin_like 889..1328 CDD:188658 159/460 (35%)
VWC 1439..1494 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840101
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3260
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.700

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