DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxd and PTGS2

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_000954.1 Gene:PTGS2 / 5743 HGNCID:9605 Length:604 Species:Homo sapiens


Alignment Length:682 Identity:138/682 - (20%)
Similarity:228/682 - (33%) Gaps:243/682 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YHIVHNQPQSSFPNYHGFSYLQGSAPYVIGNSLPTSPAPQNPFSSPASPPV--SAYGY----SFP 86
            :::|:|.|   |......||:..|..::|.                 |||.  :.|||    :|.
Human    85 WNVVNNIP---FLRNAIMSYVLTSRSHLID-----------------SPPTYNADYGYKSWEAFS 129

  Fly    87 TAGRVSCAAPPAVCEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTRSVTGDEL 151
            .....:.|.||          :...|    ...|||...|                       :|
Human   130 NLSYYTRALPP----------VPDDC----PTPLGVKGKK-----------------------QL 157

  Fly   152 P-SARLVSLVAFGEQDVPDPEFTLHNMQ---WGQIMTHDMSMQAGGTQSKKHPTRCCTDDGRLIG 212
            | |..:|..:....:.:|||:.:  ||.   :.|..||..                         
Human   158 PDSNEIVEKLLLRRKFIPDPQGS--NMMFAFFAQHFTHQF------------------------- 195

  Fly   213 LDTAHKTCFAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYG 277
            ..|.||         ..||:                  :|....|            :||:.:||
Human   196 FKTDHK---------RGPAF------------------TNGLGHG------------VDLNHIYG 221

  Fly   278 NSIQQNSDIREFQGGRMIVEERNGAKWLPLSRNVTGDCDAVDASEVCY----------RSGDVRV 332
            .::.:...:|.|:.|:|..:..:|..:.|..::.        .:|:.|          ..|....
Human   222 ETLARQRKLRLFKDGKMKYQIIDGEMYPPTVKDT--------QAEMIYPPQVPEHLRFAVGQEVF 278

  Fly   333 NQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGEN 397
            ...|||.:..||.||||||:.|.|...:|.:.|..|||.:|.|.|.:..:|...:::....|...
Human   279 GLVPGLMMYATIWLREHNRVCDVLKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHF 343

  Fly   398 MLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGSLTLSDW 462
            .||               |||.:              .|:.|.:.:..:.:|..      ||..|
Human   344 KLK---------------FDPEL--------------LFNKQFQYQNRIAAEFN------TLYHW 373

  Fly   463 FN-RPGIIEVGD---NF------DSLTRGHA-TQPEELTDINFDRQIK-HFLFRRNMPFG-SDLR 514
            .. .|...::.|   |:      :|:...|. ||..|    :|.|||. .....||:|.. ..:.
Human   374 HPLLPDTFQIHDQKYNYQQFIYNNSILLEHGITQFVE----SFTRQIAGRVAGGRNVPPAVQKVS 434

  Fly   515 SLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDLISPPILE-KLKSLYPSHEDVDLTVGASLE 578
            ...|.::|.....|:|:.|:...|:   .:|.:.:|.....:. :|::||...:.|:|.....:|
Human   435 QASIDQSRQMKYQSFNEYRKRFMLK---PYESFEELTGEKEMSAELEALYGDIDAVELYPALLVE 496

  Fly   579 AHVAGALAGPTFLCILTEQFYRTRVGDRFFFEN--GDKL--------------TGFTPDQLEELR 627
            .....|:.|.|.:          .||..|..:.  |:.:              .||     :.:.
Human   497 KPRPDAIFGETMV----------EVGAPFSLKGLMGNVICSPAYWKPSTFGGEVGF-----QIIN 546

  Fly   628 KASMARLLCDN--GNHISSM---QPEAFRTVS 654
            .||:..|:|:|  |...:|.   .||..:||:
Human   547 TASIQSLICNNVKGCPFTSFSVPDPELIKTVT 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 115/583 (20%)
peroxinectin_like 260..638 CDD:188655 89/417 (21%)
PTGS2NP_000954.1 EGF_CA 19..54 CDD:238011
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 133/664 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.