DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and igsf9ba

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:XP_009289969.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:714 Identity:118/714 - (16%)
Similarity:181/714 - (25%) Gaps:342/714 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 NSLPTSPAP------QNPFSSPASPPVSAYGYSFPTAGRVSC---AAPPAVC---EKTAY----- 105
            |||..||:.      |.|......|||.......  :|.:.|   |.||...   ||..|     
Zfish   307 NSLGISPSASAYLTVQYPARVVNMPPVIYVPRKL--SGIIRCPVDANPPVTSVRWEKDGYPLRIE 369

  Fly   106 ------RTLDGSCNHLEQPGLGVANSKYGRLLTPKY----ADGISAPT----------------- 143
                  :..|||....|     |.....|......|    ..|.|.|.                 
Zfish   370 KYPGWSQMTDGSIRVAE-----VTEDSLGTYTCVPYNVLGTMGQSPPATLVLKDPPYFNVRPGGE 429

  Fly   144 -RSVTGDELPSARLVSLVAFGEQDVPDPEFTLHNMQWGQI-----MTHDM----SMQAGGTQSKK 198
             |...|.||    ::...|.|:.::|       .:||.::     ..|::    |:|......:.
Zfish   430 YRQEAGREL----VIPCAASGDPEIP-------TIQWRKVGKPSRSKHNLLPSGSLQFVSLSKED 483

  Fly   199 HPTRCCTDDGRLIGLDTAHKTCFAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNCQ----YQGG- 258
            |....|.....:..: ||....|.|...||.|....|         :.:...:|..    |.|| 
Zfish   484 HGEWECVATNVVTSI-TASTRLFVIGTSPHAPTNVHV---------SASTSSANVSWEPGYDGGF 538

  Fly   259 ---------------------------PAEQLTVVTSYLDLSLVYGNSI-QQN-------SDI-- 286
                                       |..|:.:|...|:....|..|: .||       |::  
Zfish   539 EQTFSVWYGPVKVKNDVGTHDWLSIPVPGSQMWLVVQGLEPKTAYQFSVLAQNKLGTGPFSEVVT 603

  Fly   287 --------------------------REFQG---------------GRMIVEERNGAKWLPL--- 307
                                      |..||               .|.::|.|.|.||..|   
Zfish   604 VTTGGYPISTPEPLVLLTPPRCLTANRTQQGVLLTWLPPANHTSPIDRYVIEFRLGEKWEVLDDL 668

  Fly   308 ---------------------------------SRNVTG--DCDAVDASE--------------- 322
                                             |.||.|  ..|....:|               
Zfish   669 IPATETEIIARDLIQDSWYEFRALAIMDDLVSESSNVVGVSSTDPFPPTEISDEGLAKPVVAGIV 733

  Fly   323 --VCYRSGDV------------------RVNQNPGLAILQTILLREHNRIADALSALNPHYD--D 365
              :|:.:..:                  :..::|.|:|..|....|.......|..:.|:::  |
Zfish   734 ATICFLAAAILFSTLAACFVNKQHRRKLKRKRDPPLSITHTRKSIESPPPLTPLPGIEPYWEEPD 798

  Fly   366 R----------------------------------------------------TLFQEARKINIA 378
            |                                                    :|:::.::...:
Zfish   799 RSSYRPPSTSPQLSSGKISPESIASSRPPSLASVGGHGLYVKKLPSPRKEKELSLYKKTKRAITS 863

  Fly   379 QYQQISYYEWLPIFLGGENMLKNRLIYKAPSGSYI---NDFDPNIDPSVLNEHATAAFRYFHSQI 440
            :...:|.:|       .|......||.:.|.|.::   ||.|.::.|               .:|
Zfish   864 KKYSVSKHE-------AEVTTPIELISRGPDGRFVMDPNDIDSSLKP---------------RRI 906

  Fly   441 EG-----RLDLLSELRQ-------------VLGSLTLSDWFNRPGIIEVGDNFDSLTRGHATQP 486
            ||     ..||..|.||             |:.:|       ||.|..|..:.:|..:..|..|
Zfish   907 EGFPFVEESDLYPEFRQSDEENDDPGPLPPVMATL-------RPQISPVSSSQESYMQPPAYSP 963

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 101/655 (15%)
peroxinectin_like 260..638 CDD:188655 63/426 (15%)
igsf9baXP_009289969.2 IG 30..115 CDD:214652
I-set 139..225 CDD:254352
I-set 229..321 CDD:333254 5/13 (38%)
Ig 345..415 CDD:325142 17/74 (23%)
Ig 438..503 CDD:319273 13/76 (17%)
FN3 511..606 CDD:238020 17/103 (17%)
FN3 622..706 CDD:238020 12/83 (14%)
Atrophin-1 <924..1361 CDD:331285 9/47 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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