DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and Pxdn

DIOPT Version :10

Sequence 1:NP_996223.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_001258190.1 Gene:Pxdn / 554172 RGDID:1560694 Length:1475 Species:Rattus norvegicus


Alignment Length:716 Identity:228/716 - (31%)
Similarity:341/716 - (47%) Gaps:107/716 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SSGYHIVHNQPQSSFPNYHGFSYLQGSAPYVIGNS------------------------LPTSPA 65
            |:..|:..::|:|  ||.....:.....||.:|.:                        |..:..
  Rat   638 STRTHLFDSRPRS--PNDLLALFRYPRDPYTVGQARAGEIFERTLQLIQEHVQHGLMVDLNGTSY 700

  Fly    66 PQNPFSSPASPPVSAYGYSFPTAGRVSCAAPPAV------CEKTAYRTLDGSCNHLEQPGLGVAN 124
            ..|...||.        |....|....|.|...|      |....|||.||:||:|:.|..|.:.
  Rat   701 HYNDLVSPQ--------YLSLIANLSGCTAHRRVNNCSDMCFHQKYRTHDGTCNNLQHPMWGASL 757

  Fly   125 SKYGRLLTPKYADGISAP-----TRSVTGDELPSARLVSLVAFGEQDV-PDPEFTLHNMQWGQIM 183
            :.:.|||...|.:|.:.|     .|...|..||..||||....|.:.: ||.:||...|||||.:
  Rat   758 TAFERLLKAVYENGFNTPRGINSQRQYNGHVLPMPRLVSTTLIGTEVITPDEQFTHMLMQWGQFL 822

  Fly   184 THDM-SMQAGGTQSK----KHPTRCCTDDGRLIGLDTAHKTCFAIIVPPHDPAYSQVGTECLNFV 243
            .||: |.....:|::    :|.:..|::|          ..||::::||:||.. :.|..|:.||
  Rat   823 DHDLDSTVVALSQARFSDGQHCSSVCSND----------PPCFSVMIPPNDPRV-RSGARCMFFV 876

  Fly   244 RT-------LTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSDIREFQGGRMI----VE 297
            |:       :|....|..|   |.||:..:|||:|.|.|||::..:...||:....|.:    :.
  Rat   877 RSSPVCGSGMTSLLMNSVY---PREQINQLTSYIDASNVYGSTDHEARSIRDLASHRGLLRQGIV 938

  Fly   298 ERNGAKWLPLSRNVTGDC--DAVDASEVCYRSGDVRVNQNPGLAILQTILLREHNRIADALSALN 360
            :|:|...||.:.....:|  |..::...|:.:||.|.|:..||..:.|:..|||||||..|..||
  Rat   939 QRSGKPLLPFATGPPTECMRDENESPIPCFLAGDHRANEQLGLTSMHTLWFREHNRIAAELLKLN 1003

  Fly   361 PHYDDRTLFQEARKINIAQYQQISYYEWLPIFLG--GENMLKNRLIYKAPSGSYINDFDPNIDPS 423
            ||:|..|::.|.|||..|:.|.|:|..|||..||  |..||          |.| ..:||:::..
  Rat  1004 PHWDGDTVYHETRKIVGAEIQHITYRHWLPKILGEVGMKML----------GEY-RGYDPSVNAG 1057

  Fly   424 VLNEHATAAFRYFHSQIEGRLDLLSELRQVL--GSLTLSDWFNRPGIIEVGDNFDSLTR------ 480
            :.|..||||||:.|:.|...|..|.|..:.:  |.:.|...|..|..|......|.|.|      
  Rat  1058 IFNAFATAAFRFGHTLINPLLYRLDENFEPIPQGHVPLHKAFFSPFRIVNEGGIDPLLRGLFGVA 1122

  Fly   481 GHATQPEELTDINFDRQIKHFLFRRNMPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWE 545
            |....|.:|    .:.::...||........||.:::|||.||||:..|:|.|.:|.|..|:::|
  Rat  1123 GKMRIPSQL----LNTELTERLFSMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFE 1183

  Fly   546 GY-GDLISPPILEKLKSLYPSHEDVDLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFF 609
            .. .::.||.|.|||:.||.|..::||.....:|..|.|:..|||.:|:|:.||.|.|.|||.::
  Rat  1184 DLKNEIKSPVIREKLQRLYGSTLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRLRDGDRLWY 1248

  Fly   610 ENGDKLTGFTPDQLEELRKASMARLLCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWI 674
            ||...   |:|.||.:|::.|:||:||||.::|:.:|.:.||.....:....|.:||::||..|.
  Rat  1249 ENPGV---FSPAQLTQLKQTSLARILCDNSDNITRVQHDVFRVAEFPHGYSSCEDIPRMDLRVWQ 1310

  Fly   675 D 675
            |
  Rat  1311 D 1311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_996223.1 An_peroxidase 105..650 CDD:460804 200/579 (35%)
PxdnNP_001258190.1 leucine-rich repeat 42..60 CDD:275380
leucine-rich repeat 63..84 CDD:275380
LRR <94..>191 CDD:443914
leucine-rich repeat 109..132 CDD:275378
leucine-rich repeat 133..156 CDD:275378
leucine-rich repeat 157..180 CDD:275378
leucine-rich repeat 181..193 CDD:275378
LRRCT 189..240 CDD:214507
I-set 243..330 CDD:400151
Ig strand B 260..264 CDD:409490
Ig strand C 273..277 CDD:409490
Ig strand F 311..316 CDD:409490
Ig strand G 325..328 CDD:409490
I-set 339..426 CDD:400151
Ig strand B 356..360 CDD:409544
Ig strand C 369..373 CDD:409544
Ig strand E 392..396 CDD:409544
Ig strand F 406..411 CDD:409544
Ig strand G 419..422 CDD:409544
Ig3_Peroxidasin 443..516 CDD:143222
Ig strand B 447..451 CDD:143222
Ig strand C 460..464 CDD:143222
Ig strand E 482..486 CDD:143222
Ig strand F 496..501 CDD:143222
Ig strand G 510..513 CDD:143222
Ig4_Peroxidasin 539..607 CDD:143223
Ig strand B 539..543 CDD:143223
Ig strand C 552..556 CDD:143223
Ig strand E 574..578 CDD:143223
Ig strand F 588..593 CDD:143223
Ig strand G 602..605 CDD:143223
peroxidasin_like 861..1300 CDD:188658 159/460 (35%)
VWC 1411..1466 CDD:214564
Blue background indicates that the domain is not in the aligned region.

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