DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and LPO

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_006142.1 Gene:LPO / 4025 HGNCID:6678 Length:712 Species:Homo sapiens


Alignment Length:624 Identity:207/624 - (33%)
Similarity:310/624 - (49%) Gaps:70/624 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 VSCAAPPAV--CEK-TAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAP-------TRS 145
            |.|.||..|  |:. :.|||:.|.||:..:|.||.||....|.|..:|.||:|.|       ||:
Human   121 VGCGAPAPVVRCDPCSPYRTITGDCNNRRKPALGAANRALARWLPAEYEDGLSLPFGWTPGKTRN 185

  Fly   146 VTGDELPSARLVS--LVAF-GEQDVPDPEFTLHNMQWGQIMTHDMSM----QAGGTQSKKHPTRC 203
              |..||.||.||  :|.: .|:.|.|...:|..||||||:.||:..    :.|.::..|  .:|
Human   186 --GFPLPLAREVSNKIVGYLNEEGVLDQNRSLLFMQWGQIVDHDLDFAPDTELGSSEYSK--AQC 246

  Fly   204 CTDDGRLIGLDTAHKTCFAIIVPPHDPAYSQVGTE--CLNFVRTLTDRDSNC---QYQGGPAEQL 263
              |:..:.|     ..||.|:.||:||   :.||:  |:.|.|.    ...|   .|:....||:
Human   247 --DEYCIQG-----DNCFPIMFPPNDP---KAGTQGKCMPFFRA----GFVCPTPPYKSLAREQI 297

  Fly   264 TVVTSYLDLSLVYGNSIQQNSDIREFQG--GRMIVEER---NGAKWLPLSRNVTGDCDAVD--AS 321
            ..:||:||.|.||.:.....|.:|....  |.|.|.:.   :|..:||........|:.::  |.
Human   298 NALTSFLDASFVYSSEPSLASRLRNLSSPLGLMAVNQEVSDHGLPYLPYDSKKPSPCEFINTTAR 362

  Fly   322 EVCYRSGDVRVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYY 386
            ..|:.:||.|.:::..||...|:.||||||:|..|..|||.:|...|:||||||..|..|.|::.
Human   363 VPCFLAGDSRASEHILLATSHTLFLREHNRLARELKRLNPQWDGEKLYQEARKILGAFVQIITFR 427

  Fly   387 EWLPIFLGGENMLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELR 451
            ::|||.| |::|.|    :..|...|....||.|     :...|.|||:.|.::...:..|.|..
Human   428 DYLPILL-GDHMQK----WIPPYQGYSESVDPRI-----SNVFTFAFRFGHLEVPSSMFRLDENY 482

  Fly   452 QVLG---SLTLSD-WFNRPGIIEVGDNFDSLTRGHATQPEELTDIN--FDRQIKHFLFR-RNMPF 509
            |..|   .|.|.. :||...:::.| ..|.|.||...:..:|...|  ...::::.||: .:...
Human   483 QPWGPEPELPLHTLFFNTWRMVKDG-GIDPLVRGLLAKKSKLMKQNKMMTGELRNKLFQPTHRIH 546

  Fly   510 GSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDLISPPIL-EKLKSLYPSHEDVDLTV 573
            |.||.:::.||.||||...||..|.||.|.:..:.|....::...:| :||..||.:.:::|:.:
Human   547 GFDLAAINTQRCRDHGQPGYNSWRAFCDLSQPQTLEELNTVLKSKMLAKKLLGLYGTPDNIDIWI 611

  Fly   574 GASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMARLLCDN 638
            ||..|..|.....||...|:|.:||.:.|.||||::||...   ||.:|.:.|:|.|.:||:|||
Human   612 GAIAEPLVERGRVGPLLACLLGKQFQQIRDGDRFWWENPGV---FTNEQKDSLQKMSFSRLVCDN 673

  Fly   639 GNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWIDQK 677
             ..|:.:..:.|...|:....:.||.|.::||:.|...|
Human   674 -TRITKVPRDPFWANSYPYDFVDCSAIDKLDLSPWASVK 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 191/571 (33%)
peroxinectin_like 260..638 CDD:188655 130/392 (33%)
LPONP_006142.1 An_peroxidase 138..674 CDD:281139 191/568 (34%)
myeloperoxidase_like 283..694 CDD:188656 137/425 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150049
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.750

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