DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and Ptgs2

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_058928.3 Gene:Ptgs2 / 29527 RGDID:620349 Length:604 Species:Rattus norvegicus


Alignment Length:638 Identity:126/638 - (19%)
Similarity:206/638 - (32%) Gaps:226/638 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 APPAVCEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTRSVTGDELP-SARLVS 158
            :||.......|::.:...|          .|.|.|.| |..||....|.......||| |..::.
  Rat   112 SPPTYNVHYGYKSWEAFSN----------LSYYTRAL-PPVADDCPTPMGVKGNKELPDSKEVLE 165

  Fly   159 LVAFGEQDVPDPEFTLHNMQ---WGQIMTHDMSMQAGGTQSKKHPTRCCTDDGRLIGLDTAHKTC 220
            .|....:.:|||:.|  ||.   :.|..||    |...|..|:.|                    
  Rat   166 KVLLRREFIPDPQGT--NMMFAFFAQHFTH----QFFKTDQKRGP-------------------- 204

  Fly   221 FAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSD 285
                                .|.|.|...                    :||:.|||.::.:...
  Rat   205 --------------------GFTRGLGHG--------------------VDLNHVYGETLDRQHK 229

  Fly   286 IREFQGGRMIVEERNGAKWLPLSRNVTGDCDAVD-------ASEVCYRSGDVRVNQNPGLAILQT 343
            :|.||.|::..:...|..:.|..::.     .||       ...:.:..|.......|||.:..|
  Rat   230 LRLFQDGKLKYQVIGGEVYPPTVKDT-----QVDMIYPPHVPEHLRFAVGQEVFGLVPGLMMYAT 289

  Fly   344 ILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGENMLKNRLIYKAP 408
            |.||||||:.|.|...:|.:||..|||.:|.|.|.:..:|...:::....|....||        
  Rat   290 IWLREHNRVCDILKQEHPEWDDERLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLK-------- 346

  Fly   409 SGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGSLTLSDWFNRPGIIEVGD 473
                   |||.:              .|:.|.:                    :.||     :..
  Rat   347 -------FDPEL--------------LFNQQFQ--------------------YQNR-----IAS 365

  Fly   474 NFDSLTRGHATQPEELTDINFDRQIKHFLFR---------------------------RNMPFG- 510
            .|::|...|...|:.....:.:...|.||:.                           ||:|.. 
  Rat   366 EFNTLYHWHPLLPDTFNIEDQEYTFKQFLYNNSILLEHGLAHFVESFTRQIAGRVAGGRNVPIAV 430

  Fly   511 SDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWE---GYGDLISPPILEKLKSLYPSHEDVDLT 572
            ..:....|.::|:....|.|:.|:...|:...|:|   |..::.:     :||:||...:.::|.
  Rat   431 QAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAA-----ELKALYHDIDAMELY 490

  Fly   573 VGASLEAHVAGALAGPTFL--------------CILTEQFYRTRVGDRFFFENGDKLTGFTPDQL 623
            ....:|.....|:.|.|.:              .|.:.|:::.   ..|..|.|.::        
  Rat   491 PALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKP---STFGGEVGFRI-------- 544

  Fly   624 EELRKASMARLLCDN-------GNHISSMQPEAFRTV----SHS-----NPII 660
              :..||:..|:|:|       ..::...||....|:    |||     ||.:
  Rat   545 --INTASIQSLICNNVKGCPFASFNVQDPQPTKTATINASASHSRLDDINPTV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 116/600 (19%)
peroxinectin_like 260..638 CDD:188655 84/429 (20%)
Ptgs2NP_058928.3 EGF 21..53 CDD:278437
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 118/603 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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