DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and ptgs1

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_705942.1 Gene:ptgs1 / 246226 ZFINID:ZDB-GENE-020530-1 Length:597 Species:Danio rerio


Alignment Length:466 Identity:89/466 - (19%)
Similarity:153/466 - (32%) Gaps:154/466 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 LDLSLVYGNSIQQNSDIREFQGGRMIVEERNGAKWLP--LSRNVTGDCDAVDASEVCYRSGDVRV 332
            :|...:||:|:.:..::|..:.|::..:..||..:.|  |...|..........|.....|....
Zfish   228 VDAGHIYGDSLDRQLELRLHKDGKLKYQVLNGDIYPPTVLHAQVKMSYPPSVPPEQQLAIGQEVF 292

  Fly   333 NQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGEN 397
            ...|||.:..|:.||||||:.:.|...:|.:.|..|||.||.|.|.:..:|...|::....|...
Zfish   293 GLLPGLGMYATLWLREHNRVCEILKQEHPTWGDEQLFQTARLIIIGETIRIVIEEYVQHLSGYRL 357

  Fly   398 MLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGSLTLSDW 462
            .|                   :.||::|          |:||.:                    :
Zfish   358 KL-------------------HFDPTLL----------FNSQFQ--------------------Y 373

  Fly   463 FNRPGIIEVGDNFDSLTRGHATQPEE-------------------LTDINFDRQIKHFLFR---- 504
            .||     :...|:.|...|...|:.                   ||....::.::.|..:    
Zfish   374 QNR-----ISVEFNQLYHWHPLMPDSFYIDGDHIQYSKFIFNTSILTHYGLEKLVEAFSIQPAGQ 433

  Fly   505 ----RNM-PFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDLISPPILEK-LKSLY 563
                .|: |..|.:....|..:|:..|..:|:.|:...|:   .:..:.:|.....:.| |:.||
Zfish   434 IGGGHNIHPVVSGVAERVIVESRELRLQPFNEYRKRFNLK---PYTSFAELTGEQEMSKELEELY 495

  Fly   564 PSHEDVDLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFFEN----------------- 611
            ...:.::......||....||:.|.:.:          .:|..|..:.                 
Zfish   496 GHIDAMEFYPALLLEKTRPGAVFGESMV----------EMGAPFSLKGLMGNPICSPDYWKPSTF 550

  Fly   612 GDKLTGFTPDQLEELRKASMARLLCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWIDQ 676
            |.| |||     :.:..|::.:|:|.|                                |||...
Zfish   551 GGK-TGF-----DIVNSATLKKLVCLN--------------------------------TKWCPY 577

  Fly   677 KLYATVDPSHY 687
            ..:.| .||.|
Zfish   578 VSFHT-PPSDY 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 82/420 (20%)
peroxinectin_like 260..638 CDD:188655 81/415 (20%)
ptgs1NP_705942.1 EGF 36..68 CDD:278437
prostaglandin_endoperoxide_synthase 90..576 CDD:188648 85/452 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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