DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and Ptgs2

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_035328.2 Gene:Ptgs2 / 19225 MGIID:97798 Length:604 Species:Mus musculus


Alignment Length:626 Identity:131/626 - (20%)
Similarity:209/626 - (33%) Gaps:202/626 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 APPAVCEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTRSVTGDELP-SARLVS 158
            :||.......|::.:...|          .|.|.|.| |..||....|.......||| |..::.
Mouse   112 SPPTYNVHYGYKSWEAFSN----------LSYYTRAL-PPVADDCPTPMGVKGNKELPDSKEVLE 165

  Fly   159 LVAFGEQDVPDPEFTLHNMQ---WGQIMTHDMSMQAGGTQSKKHPTRCCTDDGRLIGLDTAHKTC 220
            .|....:.:|||:.:  ||.   :.|..||    |...|..|:.|                    
Mouse   166 KVLLRREFIPDPQGS--NMMFAFFAQHFTH----QFFKTDHKRGP-------------------- 204

  Fly   221 FAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSD 285
                                .|.|.|...                    :||:.:||.::.:...
Mouse   205 --------------------GFTRGLGHG--------------------VDLNHIYGETLDRQHK 229

  Fly   286 IREFQGGRMIVEERNGAKWLPLSRNVTGDCDAVDASEVCY-----RSGDVRVNQN-----PGLAI 340
            :|.|:.|::..:...|..:.|..::.        ..|:.|     .:....|.|.     |||.:
Mouse   230 LRLFKDGKLKYQVIGGEVYPPTVKDT--------QVEMIYPPHIPENLQFAVGQEVFGLVPGLMM 286

  Fly   341 LQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGENMLKNRLIY 405
            ..||.||||||:.|.|...:|.:.|..|||.:|.|.|.:..:|...:::....|....||     
Mouse   287 YATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLK----- 346

  Fly   406 KAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGSLTLSDWFN-RPGII 469
                      |||.:              .|:.|.:.:..:.||..      ||..|.. .|...
Mouse   347 ----------FDPEL--------------LFNQQFQYQNRIASEFN------TLYHWHPLLPDTF 381

  Fly   470 EVGD----------NFDSLTRGHATQPEELTDINFDRQIK-HFLFRRNMPFG-SDLRSLDIQRNR 522
            .:.|          |...|.....||..|    :|.|||. .....||:|.. ..:....|.::|
Mouse   382 NIEDQEYSFKQFLYNNSILLEHGLTQFVE----SFTRQIAGRVAGGRNVPIAVQAVAKASIDQSR 442

  Fly   523 DHGLASYNDMREFCGLRRAHSWE---GYGDLISPPILEKLKSLYPSHEDVDLTVGASLEAHVAGA 584
            :....|.|:.|:...|:...|:|   |..::.:     :||:||...:.::|.....:|.....|
Mouse   443 EMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAA-----ELKALYSDIDVMELYPALLVEKPRPDA 502

  Fly   585 LAGPTFL--------------CILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMARLL 635
            :.|.|.:              .|.:.|:::.   ..|..|.|.|:          :..||:..|:
Mouse   503 IFGETMVELGAPFSLKGLMGNPICSPQYWKP---STFGGEVGFKI----------INTASIQSLI 554

  Fly   636 CDN-------GNHISSMQPEAFRTV----SHS-----NPII 660
            |:|       ..::...||....|:    |||     ||.:
Mouse   555 CNNVKGCPFTSFNVQDPQPTKTATINASASHSRLDDINPTV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 121/588 (21%)
peroxinectin_like 260..638 CDD:188655 90/417 (22%)
Ptgs2NP_035328.2 EGF_CA 19..55 CDD:238011
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 123/591 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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