DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and duox-2

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_490684.1 Gene:duox-2 / 186188 WormBaseID:WBGene00018771 Length:1503 Species:Caenorhabditis elegans


Alignment Length:620 Identity:169/620 - (27%)
Similarity:270/620 - (43%) Gaps:97/620 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 AVCEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTRSVTGDELPSARLVSLVAF 162
            |:.::...:..||..|:|.....|.|.|:..|.....|:||:.:...|     |||||.:|.:.|
 Worm    31 ALQQEAETQRYDGWYNNLANSEWGSAGSRLHRDARSYYSDGVYSVNNS-----LPSARELSDILF 90

  Fly   163 -GEQDVPDPE-FTLHNMQWGQIMTHDMSMQAGGTQSKKHPTRCCTDDGRLIGLDTAHKTCFAIIV 225
             ||..:|:.. .|.....:.|::.::: ||:.|..        |.       |:|     ..|.|
 Worm    91 KGESGIPNTRGCTTLLAFFSQVVAYEI-MQSNGVS--------CP-------LET-----LKIQV 134

  Fly   226 PPHDPAYSQVGTEC-----LNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSD 285
            |..|..:.   .||     :.|.|...|:.:. .....|.||:...||::|.|.:||.:....|.
 Worm   135 PLCDNVFD---NECEGKTTIPFYRAKYDKATG-NGLNSPREQINERTSWIDGSFIYGTTQPWVSA 195

  Fly   286 IREFQGGRMIVEERNG-----AKWLPLSRNVTGDCDAVDASEVCYRSGDVRVNQNPGLAILQTIL 345
            :|.|:.|| :.|...|     ...:||:.........:.:.:..:..||.|||:||||.....||
 Worm   196 LRSFKQGR-LAEGVPGYPPLNNPHIPLNNPAPPQVHRLMSPDRLFMLGDSRVNENPGLLSFGLIL 259

  Fly   346 LREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGENMLKNRLIYKAPSG 410
            .|.||..|:.:...:|.:.|..:||.||::.||..|:|..|:::|..||.:..|.|...|.    
 Worm   260 FRWHNYNANQIYREHPDWTDEQIFQAARRLVIASMQKIIAYDFVPGLLGEDVRLSNYTKYM---- 320

  Fly   411 SYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLS-----ELRQVLG---SLTL-SDWFNRP 466
                   |::.|.:.:....||||:.||.:...:.|..     |.|..:|   :|.| .:|:|..
 Worm   321 -------PHVPPGISHAFGAAAFRFPHSIVPPAMLLRKRGNKCEFRTEVGGYPALRLCQNWWNAQ 378

  Fly   467 GIIEVGDNFDSLTRGHATQPEELTDINFDRQIKHFLFRRNMPFGS-DLRSLDIQRNRDHGLASYN 530
            .|:: ..:.|.:..|.|:|..|..|......::.::| ..|.|.. |:.:..|.|.||:|:..||
 Worm   379 DIVK-EYSVDEIILGMASQIAERDDNIVVEDLRDYIF-GPMHFSRLDVVASSIMRGRDNGVPPYN 441

  Fly   531 DMREFCGLRRAHSWEGYGDLI---SPPILEKLKSLYPSH-EDVDLTVGASLEAHVAGALAGPTFL 591
            ::|...|| ...:||...:..   ....:||||.||..: ..:|..||..||....|  .|..|.
 Worm   442 ELRRTFGL-APKTWETMNEDFYKKHTAKVEKLKELYGGNILYLDAYVGGMLEGGENG--PGEMFK 503

  Fly   592 CILTEQFYRTRVGDRFFFENGDKLTG-FTPDQLEELRKASMARLLCDNGNHISSM---------- 645
            .|:.:||.|.|.||||:|||  ||.. ||.::::.:...::..::....:...:|          
 Worm   504 EIIKDQFTRIRDGDRFWFEN--KLNRLFTDEEVQMIHSITLRDIIKATTDIDETMLQKDVFFFKE 566

  Fly   646 -----QPEAFRTVSHSNPIIPCSNIPQVDLTKWID 675
                 ||....|:.    :.||:  |.:..|.|.|
 Worm   567 GDPCPQPFQVNTIG----LEPCA--PLIQSTYWDD 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 158/564 (28%)
peroxinectin_like 260..638 CDD:188655 118/397 (30%)
duox-2NP_490684.1 An_peroxidase 39..552 CDD:281139 158/561 (28%)
dual_peroxidase_like 41..596 CDD:188652 168/610 (28%)
FRQ1 792..>895 CDD:227455
Ferric_reduct 1041..1182 CDD:280043
NOX_Duox_like_FAD_NADP 1224..1408 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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