DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pxd and hpx-2

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_506432.1 Gene:hpx-2 / 179880 WormBaseID:WBGene00008627 Length:718 Species:Caenorhabditis elegans


Alignment Length:638 Identity:191/638 - (29%)
Similarity:312/638 - (48%) Gaps:53/638 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SLPTSPAPQNPFSSPASPPVSAYGYSFPTAGRVSCAAPPAVCEK---TAYRTLDGSCNHLEQPGL 120
            |..|:...::|  .|.....||...|...|.| .|::||..|..   |:.|::.|.||:.:...|
 Worm   111 SSETTTTTEHP--DPTRSKRSAIFRSKRQANR-RCSSPPINCNNRFHTSIRSITGLCNNRQNSDL 172

  Fly   121 GVANSKYGRLL-TPKYADGIS-APTRSVTGDELPSARLVSLVAFGEQD--VPDPEFTLHNMQWGQ 181
            |.:.|...|:| ...||||:. ..||||.|.|||||||:|.....:::  |..|.....:|..||
 Worm   173 GNSVSPLRRILGAASYADGLGRIRTRSVNGGELPSARLISNRIHDDRNNQVFSPSINHLHMIIGQ 237

  Fly   182 IMTHDMSMQAGGTQSKKHPTRCCTDDGRLIGLDTA--------HKTCFAIIVPPHDPAYSQVGTE 238
            .:.||:...         |:....|.|   .||.:        ...|..|.:|.:||.::   |.
 Worm   238 FIAHDVVFM---------PSSVARDGG---ALDCSACNSPQRVSPNCAPITIPRNDPYFN---TP 287

  Fly   239 CLNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSDIREFQGGRMIVEERNGAK 303
            |:...|.|     |.|...|...|:...:.:||||.|||::..:...:|.||.|:|:..:..|..
 Worm   288 CMRLTRAL-----NGQENFGVRSQIGQNSHFLDLSPVYGSADCEAETVRSFQEGKMLTFDDLGYT 347

  Fly   304 WLPLSRNVTGDCDAVDASEVCYRSGDVRVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTL 368
            ..|.:.| ..:|.: .|...|:..||.|.:.:|.|..:.|||::||||:|:.:....|.::|..:
 Worm   348 LPPQNAN-DSNCQS-SAPFHCFTCGDFRNSLHPALIPVHTILIKEHNRLAEQVRVARPRFNDEQI 410

  Fly   369 FQEARKINIAQYQQISYYEWLPIFLGGENMLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAF 433
            ||..|||.|..:|.|.|.|::|.:| ....::|..:....:|.: ..:..::|||:..|.|.|||
 Worm   411 FQLVRKIMIGMWQHIVYNEYIPKYL-PRRTIRNFALRPLRNGVH-RGYSTSVDPSISAEFAGAAF 473

  Fly   434 RYFHSQIEGRLDLLSELRQVLGSLTLSD---WFNRPGIIEVGDNFDSLTRGHATQPEELTDINFD 495
            |:.|||.......|:|..:..|:..|.:   :.::..:..:| .::.:..|....|...:|..|.
 Worm   474 RFGHSQSRFDFPRLTENGRPAGNYDLGNDIFYADQMYLTRIG-GWEPVMNGMVRMPAMKSDRYFS 537

  Fly   496 RQIKHFLF--RRNMPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEGYGDLISPPILEK 558
            ..|::.:|  |.....|.||.|::|||.||.||..|...|:..||....|:.......|...::.
 Worm   538 FGIRNQMFEIRGRNGSGVDLVSINIQRGRDMGLFPYIQYRQLVGLPTVTSFNELNTTFSQENIQA 602

  Fly   559 LKSLYPSHEDVDLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFFEN-GDKLTGFTPDQ 622
            |:::|....|:||.||..||..::|...|||...::.|||...:.|||||:|: .:....||.::
 Worm   603 LRNVYSDPADIDLYVGIMLEEPLSGGQLGPTASFMIGEQFRALKRGDRFFYESIAEGTDNFTQEE 667

  Fly   623 LEELR-KASMARLLCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWI 674
            :.||| |.|:|:::|.|.:..:.:..:.|   .|.:..:.|:::||:|:.:::
 Worm   668 ISELRNKTSLAKIICTNMDFAARINTDIF---DHRSRQVACTSLPQLDIDRFL 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 171/556 (31%)
peroxinectin_like 260..638 CDD:188655 120/384 (31%)
hpx-2NP_506432.1 An_peroxidase 158..696 CDD:376988 171/562 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49305
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11475
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.