DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and skpo-1

DIOPT Version :10

Sequence 1:NP_996223.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_495768.1 Gene:skpo-1 / 174340 WormBaseID:WBGene00009897 Length:655 Species:Caenorhabditis elegans


Alignment Length:668 Identity:198/668 - (29%)
Similarity:311/668 - (46%) Gaps:106/668 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GFSYLQGSAPYVIGNSLPTSPA----------PQNPFSSP----ASPPVSAYGYSFPTAGRVS-- 92
            |...|....|......:||:..          |..|.|.|    :...|.|......::|:::  
 Worm    54 GTCSLTSPTPLTRQQDVPTARTFDDQQDRQFLPSRPSSIPEGCNSVMTVEAETRRIFSSGQLTAR 118

  Fly    93 -----CA----APPA---VCEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADG----ISA 141
                 ||    ||..   .|....||::||:||:|:.|..|.|.:.:.||:...|.||    :||
 Worm   119 FRQQMCAEEQVAPDCSINQCFHKKYRSMDGTCNNLQNPVKGAAFTAFTRLMPAAYDDGFNTLVSA 183

  Fly   142 PTRSVTGDELPSARLVSL-VAFGEQDVPDPEFTLHNMQWGQIMTHDMSMQAGGTQSKKHPTRC-C 204
            ..|:     .|:.|.||: :...|:.:|....:| .|.:||.::||::..|.       ...| |
 Worm   184 SRRN-----RPNPREVSVFLLSSERSLPGHVNSL-LMLFGQFVSHDITSNAA-------QNFCGC 235

  Fly   205 TDDGRLIGLDTAHKTCFAIIVPPHDPAYSQVGTECLNFVRTLTDRDSNCQYQGGPAEQLTVVTSY 269
            .:.|.:         |.:|..||.|.:     ..|:.|.|:.....:. |: |...|||.:.|:.
 Worm   236 QNSGPM---------CASIFAPPSDRS-----RRCIPFTRSFPICGTG-QF-GRVREQLNMNTAA 284

  Fly   270 LDLSLVYGNSIQQNSDIREFQGGRMIVEERNGAKWLPLSRNVTGDCDAVDASEVCYRSGDVRVNQ 334
            :|.||:||:   :....|..:...|:.....|.:..|.:.| .|...|          ||.|...
 Worm   285 IDASLIYGS---EAITARSLRFAAMLRTSMIGGRMFPPNTN-PGSLTA----------GDGRAIL 335

  Fly   335 NPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGENML 399
            ..|||.|.|..||.||.:|..|..:|.|::...:|||:|||.....|.|:|.|::|..:|..:  
 Worm   336 FVGLAALHTSFLRLHNNVAARLQNMNRHWNADRIFQESRKIVGGIVQVITYQEFVPELIGDAS-- 398

  Fly   400 KNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGSLTLSDWFN 464
                  |...|:| |.::||::..||||.|..|:| .|..|:....|::...|.:......|..|
 Worm   399 ------KTILGAY-NGYNPNVEIGVLNEFAAGAYR-LHGMIQETYPLVNSQFQEVNRYRFIDGVN 455

  Fly   465 RPGIIEVGDNFDSLTRGHAT----QPEELTDINFDRQIKHFLFRRNMPFGSDLRSLDIQRNRDHG 525
              .|..|.:|.|::.||..|    .|:.||....:|     ||..::    |:.:::|||.||||
 Worm   456 --NINHVLNNIDAIYRGMMTVPVRSPQRLTTSVTER-----LFGGSV----DMAAVNIQRGRDHG 509

  Fly   526 LASYNDMREFCGLRRAHSWEGYGDLISPPILEKLKSLYPSHEDVDLTVGASLEAHVAGALAGPTF 590
            |.||||.|.||.||...|:..:.::....:.:::..||.:.:|:|..||..||...||:|.|.||
 Worm   510 LRSYNDYRRFCNLRPITSFNDWPEVPDENVRQRIGQLYRTPDDLDFYVGGILEQPAAGSLLGATF 574

  Fly   591 LCILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMARLLCDNGNHISSMQPEAFRTVSH 655
            .|::.:||.|.|.||||::||...   ||..||.||::.:::.:||..|:::..:...|| .:.:
 Worm   575 ACVIGKQFERLRDGDRFYYENPGV---FTSPQLAELKRTTLSWVLCQTGDNMVRVGRRAF-DIEN 635

  Fly   656 SNPIIPCSNIPQVDLTKW 673
            .:..:|||:|..::|..|
 Worm   636 GSRAVPCSSITGLNLEAW 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_996223.1 An_peroxidase 105..650 CDD:460804 173/554 (31%)
skpo-1NP_495768.1 ShKT 22..56 CDD:214586 1/1 (100%)
An_peroxidase 143..631 CDD:460804 173/554 (31%)

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