DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and PXDNL

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_653252.4 Gene:PXDNL / 137902 HGNCID:26359 Length:1463 Species:Homo sapiens


Alignment Length:626 Identity:207/626 - (33%)
Similarity:298/626 - (47%) Gaps:100/626 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 CEKTAYRTLDGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTRSV-----TGDELPSARLVSL 159
            |....||..||:||:|:||..|.|.:.:.|||.|.|.|||.|| |.:     :...||..|||:.
Human   722 CFHAKYRAHDGTCNNLQQPTWGAALTAFARLLQPAYRDGIRAP-RGLGLPVGSRQPLPPPRLVAT 785

  Fly   160 V-AFGEQDVPDPEFTLHNMQWGQIMTHDM--SMQAGGTQSKKHPTRC---CTDDGRLIGLDTAHK 218
            | |......||..:|...|.||..:.||:  ::.|..|........|   ||:|.....::|.|.
Human   786 VWARAAAVTPDHSYTRMLMHWGWFLEHDLDHTVPALSTARFSDGRPCSSVCTNDPPCFPMNTRHA 850

  Fly   219 TCFAIIVPPHDPAYSQVGTE--CLNFVRTLTDRDSNCQYQGGPA---------EQLTVVTSYLDL 272
                      ||.    ||.  |:.|.|:     |.....|.|:         ||:...|:|:|.
Human   851 ----------DPR----GTHAPCMLFARS-----SPACASGRPSATVDSVYAREQINQQTAYIDG 896

  Fly   273 SLVYGNSIQQNSDIREFQGGRMIVEERNGAKW-------LPLSRNVTGDCDAVDASEVCYRSGDV 330
            |.|||:|.:::..:|:....|.::  :.|..|       ||.|.....:|...:....|:.:||.
Human   897 SNVYGSSERESQALRDPSVPRGLL--KTGFPWPPSGKPLLPFSTGPPTECARQEQESPCFLAGDH 959

  Fly   331 RVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLG- 394
            |.|::..||.:.|:..|||||:|..|||||||::..|::||||||..|:.|.|:|..|||..|| 
Human   960 RANEHLALAAMHTLWFREHNRMATELSALNPHWEGNTVYQEARKIVGAELQHITYSHWLPKVLGD 1024

  Fly   395 -GENMLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLLSELRQVLGSLT 458
             |..||:.   |:.        ::||::..::|..||||||:.|:.|.   .:|..|...||.::
Human  1025 PGTRMLRG---YRG--------YNPNVNAGIINSFATAAFRFGHTLIN---PILYRLNATLGEIS 1075

  Fly   459 LSD------WFNRPGIIEVGDNFDSLTRG------------HATQPEELTDINFDRQIKHFLFRR 505
            ...      .|:...||:.| ..|.:.||            :...||          :...||..
Human  1076 EGHLPFHKALFSPSRIIKEG-GIDPVLRGLFGVAAKWRAPSYLLSPE----------LTQRLFSA 1129

  Fly   506 NMPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRRAHSWEG-YGDLISPPILEKLKSLYPSHEDV 569
            ......|..:..|||.||||:..|.|.|.||.|....::|. ..::....|.:||:.||.|..|:
Human  1130 AYSAAVDSAATIIQRGRDHGIPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGSPGDI 1194

  Fly   570 DLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMARL 634
            ||.....:|..:.|...|||.:|:...||.|.|.||||::||...   |||.||.:|::||::|:
Human  1195 DLWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGV---FTPAQLTQLKQASLSRV 1256

  Fly   635 LCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWID 675
            |||||:.|..:|.:.|....:....:.||.||:|||..|.|
Human  1257 LCDNGDSIQQVQADVFVKAEYPQDYLNCSEIPKVDLRVWQD 1297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 194/587 (33%)
peroxinectin_like 260..638 CDD:188655 136/414 (33%)
PXDNLNP_653252.4 LRR 1 51..72
leucine-rich repeat 52..85 CDD:275378
LRR_8 53..134 CDD:316378
LRR 2 75..96
leucine-rich repeat 86..123 CDD:275378
LRR 3 99..120
LRR_8 123..182 CDD:316378
LRR 4 123..144
leucine-rich repeat 124..147 CDD:275378
LRR 5 147..168
leucine-rich repeat 148..171 CDD:275378
leucine-rich repeat 172..184 CDD:275378
LRRCT 180..232 CDD:214507
Ig_3 234..309 CDD:316449
Ig_3 329..402 CDD:316449
Ig 432..505 CDD:325142
Ig 528..596 CDD:325142
peroxidasin_like 851..1286 CDD:188658 153/473 (32%)
VWC 1400..1450 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165150042
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3260
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.700

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