DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and duox1

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:XP_031755009.1 Gene:duox1 / 100486194 XenbaseID:XB-GENE-1005876 Length:1505 Species:Xenopus tropicalis


Alignment Length:608 Identity:155/608 - (25%)
Similarity:239/608 - (39%) Gaps:118/608 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 DGSCNHLEQPGLGVANSKYGRLLTPKYADGISAPTRSVTGDELPSARLVSLVAFGEQDVPDPEFT 173
            ||..|:|.|...|.|..:..||:...|:||:   .:::...|||:.|.:|.||            
 Frog    35 DGWYNNLHQHNRGSAGFRLLRLVPAAYSDGV---YQAIQEPELPNPRQISNVA------------ 84

  Fly   174 LHNMQWGQIMTHDMSMQA-GGTQSKKHPTRCCTDDGRLIG-------LDTAHKTCFA----IIVP 226
                           ||. .|..|.::.|..    |...|       :.|.:..|.|    |.||
 Frog    85 ---------------MQGDSGLSSNRNRTVL----GVFFGYHVLSEIISTENSGCPAEFLNIAVP 130

  Fly   227 PHDPAY--SQVGTECLNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDLSLVYGNSIQQNSDIREF 289
            ..|..:  ...|...|.|.|:...:.|. :....|..|:..||:::|.|.:||:|...:..:|.|
 Frog   131 KGDKIFDPDATGQVMLPFQRSQWWKCSG-ESPNNPRHQINSVTAWIDGSSIYGSSHSWSDALRSF 194

  Fly   290 QGGRMIVEERNGAKWLPLSRNVTGDC----DAVDAS------EVCYRSGDVRVNQNPGLAILQTI 344
            .||::..:..      |:.....||.    .|.|.|      |..|..|:.|.|:||.|..:..:
 Frog   195 SGGKLASDSD------PMFPKEAGDALLMWRAPDPSTGHRGKEGIYGFGNARANENPFLQAVSIL 253

  Fly   345 LLREHNRIADALSALNPHYDDRTLFQEARKINIAQYQQISYYEWLPIFLGGENMLKNRLIYKAPS 409
            ..|.||.:|...:...|.:.|..:|...||..||.||.:..|||||:||..|             
 Frog   254 WFRYHNYLALQFAKKYPQWSDEDVFHNTRKWIIATYQNVVMYEWLPVFLQKE------------- 305

  Fly   410 GSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGRLDLL----------SELRQVLGS-------- 456
            .|....::.::|.|:.:|        |.:.::....||          .....|..|        
 Frog   306 VSAYEGYNQHVDASLSHE--------FQAAVQFMATLLPAGIYTRNKTCHFHNVQSSDGGFWPAY 362

  Fly   457 -LTLSDWFNRPGIIEVGDNFDSLTRGHATQPEELTDINFDRQIKHFLFRRNMPFGSDLRSLDIQR 520
             |..|.|..:...|:...:.|:|..|..:|..|..|......::.:.:........|..|..||:
 Frog   363 RLCDSYWKRKNPNIKTAQDIDNLLLGMISQIAEKEDNVVVEDLRDYWYGTLKYTRMDYISWSIQQ 427

  Fly   521 NRDHGLASYNDMREFCGLRRAHSWEGYGDLI---SPPILEKLKSLYPSH-EDVDLTVGASLEAHV 581
            .||.||.|||..|:..||....:|......:   :..:.|.|.:||.:. |.::|..|..||   
 Frog   428 GRDFGLCSYNHARQHFGLSPIANWSEINRSLYQRNKELFEDLANLYGNDTEKLELFPGVMLE--- 489

  Fly   582 AGALAGPTFLCILTEQFYRTRVGDRFFFENGDKLTGFTPDQLEELRKASMAR-LLCDNGNHISSM 645
            :....|.....|:.:||.|.|.||||:||| .|...||.:::|.::|.:... :|......:...
 Frog   490 SDGDPGELLTAIIMDQFQRLRDGDRFWFEN-SKNGLFTLEEIERIKKTTFHDVILSVTSADLGDF 553

  Fly   646 QPEAFRTVSHSNPIIPCSNIPQV 668
            ||:.|:.|:..    ||....|:
 Frog   554 QPDVFKWVNGD----PCPQPEQI 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 148/581 (25%)
peroxinectin_like 260..638 CDD:188655 109/411 (27%)
duox1XP_031755009.1 dual_peroxidase_like 34..592 CDD:188652 155/608 (25%)
PTZ00183 753..920 CDD:185503
EFh 815..876 CDD:238008
PLN02292 1043..>1374 CDD:215165
NOX_Duox_like_FAD_NADP 1231..1505 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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