DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pxd and epx

DIOPT Version :9

Sequence 1:NP_001163633.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster
Sequence 2:XP_021326443.1 Gene:epx / 100331172 ZFINID:ZDB-GENE-130425-2 Length:828 Species:Danio rerio


Alignment Length:647 Identity:194/647 - (29%)
Similarity:293/647 - (45%) Gaps:114/647 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 CEKTAYRTLDGSCNH----LEQPGLGVANSKYGRLLTPKYADGISA-----PTRSVTGDELPSAR 155
            |....|||:.|.||:    .|.|..|.||:.|.|.|:|:|.|...|     |..:.....||..|
Zfish    86 CLSKRYRTITGHCNNSYFDRENPQWGAANTPYARWLSPQYEDPRGAPRGWSPQHTYHNHTLPPVR 150

  Fly   156 LVSL--VAFGEQDV---PDPEFTLHN------MQWGQIMTHDMSMQAGGTQSKKHPTRC-CTDDG 208
            |.::  |....|:|   .:...||..      ::|||.:.||:::......:....||. ||   
Zfish   151 LTAVPNVRRVSQEVLYTQNGNITLDGSLSHLLVEWGQWIDHDLTLTPQSPSTAAFRTRADCT--- 212

  Fly   209 RLIGLDTAHKTCFAIIVPPHDP-AYSQVGTECLNFVRTLTDRDSNCQYQGGPAEQLTVVTSYLDL 272
            |....||   .||.|.:|..|| :::|   .|:.|.|:.    .:|....|..|||..:|:::|.
Zfish   213 RTCSTDT---PCFPIQIPLSDPRSHTQ---SCMAFFRSA----PSCSSPLGQREQLNAITAFVDS 267

  Fly   273 SLVYGNSIQQNSDIREFQG--GRMIVEE---RNGAKWLPLSRNVTGDCD---------------- 316
            |:|||:|......:|....  |.:.|.:   ..|..::|.........|                
Zfish   268 SMVYGSSDALALSLRNLSSPLGLLAVNQFHSDQGFDFMPFLNRTQPQLDPCGPRQHSDHTTAPQQ 332

  Fly   317 ----AVDASEVCYRSGDVRVNQNPGLAILQTILLREHNRIADALSALNPHYDDRTLFQEARKINI 377
                ::..:..|:::||.|.|::.|:..|.|:.||||||:|..|..:|||:...||:||||||..
Zfish   333 NNNISMGNASFCFQAGDSRANEHLGMIALHTLFLREHNRLAKELHRINPHWSPDTLYQEARKILG 397

  Fly   378 AQYQQISYYEWLPIFLGGENMLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIE- 441
            |.:|.:::..:||..||..   .|:::..|..|     :||..|||:.|..:|||||:.|..:. 
Zfish   398 AVHQILTWDHYLPHVLGRS---ANQILMPAYKG-----YDPAADPSISNIFSTAAFRFAHVTVHP 454

  Fly   442 --GRLDLLSELRQVLGSLTL-----SDWFNRPGIIEVGDNFDSLTRGHATQP-----------EE 488
              .||.....|.....:|.|     :.|    .:::.| ..|.:.||....|           ||
Zfish   455 VVNRLGPDYRLSPAHPALPLHHSLFASW----RVVKEG-GIDPVLRGLLVSPAKLQTADQMMVEE 514

  Fly   489 LTDINFDRQIKHFLFRRNMPFGSDLRSLDIQRNRDHGLASYNDMREFCGL-----RRAHSWEGYG 548
            ||:..|..|       ..:|.  ||.:|::||.|||||..|:..||.|||     ..|.|    |
Zfish   515 LTERLFQAQ-------GGLPL--DLAALNLQRGRDHGLQGYSVWRELCGLPAPVNESALS----G 566

  Fly   549 DLISPPILEKLKSLYPSHEDVDLTVGASLEAHVAGALAGPTFLCILTEQFYRTRVGDRFFFENGD 613
            .|.:..:..||..||...|::|:.|||..|..:.|...||...|::..||...|.||||:::|..
Zfish   567 ILGNTALARKLLDLYGVAENIDVWVGAIAEPALPGGRVGPLLACLIARQFRGLRDGDRFWWQNEG 631

  Fly   614 KLTGFTPDQLEELRKASMARLLCDNGNHISSMQPEAFRTVSHSNPIIPCSNIPQVDLTKWID 675
            .   |:..|.:.||..|::|::|:| .||..:..:.|........::.||||...:|:.|.:
Zfish   632 V---FSSGQRDALRSTSLSRIICEN-THIQQVPLDPFTNTMRPEELLSCSNIQLFNLSAWTE 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PxdNP_001163633.1 An_peroxidase 105..643 CDD:281139 185/608 (30%)
peroxinectin_like 260..638 CDD:188655 131/426 (31%)
epxXP_021326443.1 An_peroxidase_like 111..689 CDD:326323 185/620 (30%)
CCP <711..747 CDD:153056
EGF_CA 748..>775 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584261
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 1 1.000 - - FOG0000202
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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