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Protein Alignment Sp212 and CG4998

DIOPT Version :9

Sequence 1:	NP_996209.2	Gene:	Sp212 / 2768666	FlyBaseID:	FBgn0053329	Length:	516	Species:	Drosophila melanogaster
Sequence 2:	NP_001036609.1	Gene:	CG4998 / 39808	FlyBaseID:	FBgn0036612	Length:	1185	Species:	Drosophila melanogaster

Alignment Length:	471	Identity:	109/471 - (23%)
Similarity:	169/471 - (35%)	Gaps:	155/471 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly   121 EYRPPNSFFNRFY-------------------ELDISGSLASFPSSVFNPFTRDGLDVNVQTVF- 165
            |..|..|.||..|                   ..::||.....||:    ..|.|..:|:..::
  Fly   786 ESSPYESSFNSIYPGSSPDFGGYGEYSQHVERSANVSGGDTDRPSN----SGRRGKQLNLGPLYN 846

  Fly   166 ----YPTSSRGND----------------IWRGFTQPWTTVSNRSPAVVTPAPTPTEIFW-NQPV 209
                .|..:.|:|                :|.|                 .||.....:: |:||
  Fly   847 IPTPAPGEAAGSDRITFPRDRRRRSVEDGVWAG-----------------AAPKEQRAYYGNRPV 894

  Fly   210 PSVPITFAPPVPTITSSPAPAPPPPPPLPTPPAVVTVPPATPPPQRFDPRSQISSVVCGREGST- 273
            ..          |...:......|..|             ..|||:|..        ||...:.
  Fly   895 EK----------TCRINEVCCRRPLRP-------------QAPPQQFGR--------CGVRNAAG 928

  Fly   274 ------TPFIVRG-NEFPRGQYPWLSAVYHKEVRALAFKCRGSLISSSIVISAAHCVHRMTEDRV 331
                  .|..|.| :||  |:|||..|:..|:.:...:.|.|:||.:..:||||||:.......:
  Fly   929 ITGRIKNPVYVDGDSEF--GEYPWHVAILKKDPKESIYACGGTLIDAQHIISAAHCIKSQNGFDL 991

  Fly   332 VVGLGRYDLD------DYGEDGAEMRNVMRLLWHPDYNTRSYSDADIALITIERPVTF--NDIIA 388
            .|.||.:|::      .|.|     |:|:.:..||:|...:. |.|:|::.:::||.|  |..|:
  Fly   992 RVRLGEWDVNHDVEFFPYIE-----RDVVSVHIHPEYYAGTL-DNDLAVLKLDQPVDFTKNPHIS 1050

  Fly   389 PICM------------WTVEASRTVSTTGFIAGWGRDEDSSRTQYPRV---VEAEIASPTVCAST 438
            |.|:            ||             .|||:|......:|..:   |:..|.|...|.|.
  Fly  1051 PACLPDKYSDFTGARCWT-------------TGWGKDAFGEHGKYQNILKEVDVPILSHQQCESQ 1102

  Fly   439 WRGT------MVTERSLCAGNRDGSGPCVGDSGGGLMVKQGDRWLLRGIVSAGERGPAGTCQLNQ 497
            .|.|      .:....:|||..:|...|.||.||.|:..:.....:.|:||.|    .|..|:|.
  Fly  1103 LRNTRLGYSYKLNPGFVCAGGEEGKDACKGDGGGPLVCDRNGAMHVVGVVSWG----IGCGQVNV 1163

  Fly   498 YVLYCDLSKHINWISE 513
            ..:|..:|.::.||.:
  Fly  1164 PGVYVKVSAYLPWIQQ 1179

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.