DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp212 and scaf

DIOPT Version :9

Sequence 1:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_610180.1 Gene:scaf / 35505 FlyBaseID:FBgn0033033 Length:655 Species:Drosophila melanogaster


Alignment Length:564 Identity:114/564 - (20%)
Similarity:182/564 - (32%) Gaps:182/564 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LPKLTRLSYNEQILCSASEYRPPNS----------FFNRFYELDI-------SGSLAS------- 143
            |||:........:.|:   ||||.:          ..|..|:.|.       :|.:::       
  Fly   105 LPKIQNCDPETTVCCT---YRPPPTTTTTTTTSVPVANCAYDSDCVTPDNCRNGEISAINYVKKQ 166

  Fly   144 -------------FPSSVFNPFTRDGLDVNVQTVFYPTSSRGNDIWRGFT------QPWTTVSNR 189
                         .||:.   .|.||...|:....:|..::...:....|      ||.|.|...
  Fly   167 GPNRCPAPNICCRIPSTT---LTEDGYIFNLPEKTFPLPTKPAVLAMPSTQAPFRPQPTTAVPAS 228

  Fly   190 SPAV--VTPAPTPTEIFWNQPVPSVPITFAPPVPTITSSPAPAP-----PPPPPLPT-------- 239
            .|.:  :.|:.|....:........|: :.||.|...|:.:..|     |.|.|.||        
  Fly   229 RPTIEYLPPSTTQHPSYEKVQTSRRPV-YLPPSPATESASSLIPKIRPRPEPRPQPTRRPTNEYL 292

  Fly   240 PPAVVTVPPATPPPQRFDPRSQ------------------------------ISSVVCGREG--- 271
            |||.....|...|.:...|.:|                              .|::||..|.   
  Fly   293 PPAAANEIPRFEPDRAPQPSNQKPIYRGEDQLSPQIFPTPQPANVPKHFAKCASALVCTSENFCN 357

  Fly   272 -----STTPFIVRGNEF----------------------------------------------PR 285
                 |.||..:...|.                                              |.
  Fly   358 AIGVLSETPVELSPMEAAFRVPLTDCLQTENGSPGKCCRDPNYVDPWPVNLAGVCATRNKRTKPT 422

  Fly   286 G---------QYPWLSAVYHKEVRALAFKCRGSLISSSIVISAAHCVHRMTEDRVVVGLGRYDLD 341
            |         :.||.:.:..:..:.|.  |.|::|....|:|:|.||:.:....:.|..|.::|.
  Fly   423 GVKDLDANFAEIPWQAMILRESSKTLI--CGGAIIGDQFVLSSASCVNGLPVTDIRVKAGEWELG 485

  Fly   342 DYGED-GAEMRNVMRLLWHPDYNTRSYSDADIALITIERPVTFNDIIAPICMWTVEASRTVSTTG 405
            ...|. ..::..|..:..||||:. |.:..|:|:|.:||.:.|...|.|||:  .:.....|...
  Fly   486 STNEPLPFQLTGVKTVDVHPDYDP-STNSHDLAIIRLERRLEFASHIQPICI--SDEDPKDSEQC 547

  Fly   406 FIAGWGRDEDSSRTQ--YPRVVEAEIASPTVCASTWRGTMVTERSLCAGNRDGSGPCVGDSGGGL 468
            |.:|||:...|...:  ...|.:....:.:.|::       ...|:|:..:..|  |..|.|..|
  Fly   548 FTSGWGKQALSIHEEGALMHVTDTLPQARSECSA-------DSSSVCSATKFDS--CQFDVGSAL 603

  Fly   469 MVKQGDRWLLRGIVSAGERGPAGTCQLNQYVLYCDLSKHINWIS 512
            ....|....|:||. |||    .:|...|.|.:.  ...|.||:
  Fly   604 ACGSGSSVRLKGIF-AGE----NSCGEGQTVRFA--KPDIKWIN 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp212NP_996209.2 GD_N 23..122 CDD:292649 4/18 (22%)
Tryp_SPc 277..514 CDD:238113 62/294 (21%)
Tryp_SPc 277..511 CDD:214473 60/291 (21%)
scafNP_610180.1 FtsK <198..>334 CDD:332908 27/136 (20%)
Tryp_SPc 428..616 CDD:238113 48/201 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435557
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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