DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp212 and gd

DIOPT Version :9

Sequence 1:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001259479.1 Gene:gd / 32159 FlyBaseID:FBgn0000808 Length:531 Species:Drosophila melanogaster


Alignment Length:624 Identity:152/624 - (24%)
Similarity:239/624 - (38%) Gaps:221/624 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LIVIVSLIALAGAQLVPENSCPDYFRY--------------VNDAFQGVQGEITLPSLMRGRNRI 55
            ||:.:..:..|.||.:|.:.||..|:|              ..|..|.:...:||.  |||:   
  Fly     9 LILCIEHVTKAVAQGMPISPCPKVFQYRFDGSEWFGLMAVRSPDGHQPLHIRVTLS--MRGK--- 68

  Fly    56 DIRFSQR--GEQDASAVGSLIPYPDENAVRQLTGSAKFRIAVRPNSSNGLPKLTRLSYNEQILCS 118
            ...::|.  ||.:....|            :.|.:|.....:|....:..|||..:|.|..::|.
  Fly    69 PTTYTQNYLGEIELLTRG------------KFTHNAPVLYKIRFPKHHFPPKLLLMSANNHVICF 121

  Fly   119 ASEYRPPNSFFNRFYELDISGSLASFP---SSVFNPFTRDGLDVNVQTVFYPTSSRGNDIWRGFT 180
            .|   ..:|.|....:|:....|:..|   ||:.       ||...:.|      |..|      
  Fly   122 GS---GEHSIFMTQIQLEHIRKLSFIPDKKSSLL-------LDPEEEEV------RKTD------ 164

  Fly   181 QPWTTVSNRSPAVVTPAPTPTEIFWNQPVPSVPITFAPPVPTITSSPAPAPPPPPPLPTPPAVVT 245
                                                                            .
  Fly   165 ----------------------------------------------------------------D 165

  Fly   246 VPPATPPPQ-RFDPRSQISSVVCGR--------------------------EGSTTPFIVRGNE- 282
            .||:||..| :..|.:|....:|||                          :|.|:|..|..:| 
  Fly   166 KPPSTPHIQFKKKPFAQAPKEICGRIDRDLDFHLSQRTESLHVAIGEPKSSDGITSPVFVDDDED 230

  Fly   283 --------------------------FPRGQYPWLSAVYHKEVRALAFKCRGSLISSSIVISAAH 321
                                      ..||.:|||:|:|...:.:|.|:|.|||:|:.:|||:||
  Fly   231 DVLEHQFVDESEAEAIESDSADSLPSITRGSWPWLAAIYVNNLTSLDFQCGGSLVSARVVISSAH 295

  Fly   322 CV----HRMTEDRVVVGLGRYDLDDYGEDGAEMRNVMRLLWHPDYNTR--SYSDADIALITIERP 380
            |.    .|.|.:.|:|.|||::|.::.|:|:....|..:..|||:|::  || |||||:|.::..
  Fly   296 CFKLFNKRYTSNEVLVFLGRHNLKNWNEEGSLAAPVDGIYIHPDFNSQLSSY-DADIAVIILKDE 359

  Fly   381 VTFNDIIAPICMWTVEASRT---VSTTGFIAGWGRD----------------EDSSRTQYPRVVE 426
            |.||..|.|.|:|: .:|:|   |...|.:.||..|                :.|:....|:||:
  Fly   360 VRFNTFIRPACLWS-GSSKTEYIVGERGIVIGWSFDRTNRTRDQKLSSELPGKKSTDASAPKVVK 423

  Fly   427 AEIASPTVC--ASTWRGTMVTERSLCAG--------NRDGSGPCVGDSGGGLMVKQGDRWLLRGI 481
            |.|.....|  |:....::.:.|:.|||        ::.|:....|.||.||.:::.:||:|||.
  Fly   424 APIVGNAECFRANAHFRSLSSNRTFCAGIQAEERDTHQSGASIYTGISGAGLFIRRNNRWMLRGT 488

  Fly   482 VSAG----ERGPAGT----CQLNQYVLYCDLSKHINWIS 512
            |||.    |...|.:    |..|||::|.|::|.::||:
  Fly   489 VSAALPAVETPDAESSHKLCCKNQYIIYADVAKFLDWIT 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp212NP_996209.2 GD_N 23..122 CDD:292649 25/114 (22%)
Tryp_SPc 277..514 CDD:238113 96/306 (31%)
Tryp_SPc 277..511 CDD:214473 94/303 (31%)
gdNP_001259479.1 GD_N 27..124 CDD:292649 25/116 (22%)
Tryp_SPc 257..526 CDD:238113 92/270 (34%)
Tryp_SPc 258..526 CDD:214473 92/269 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BPFK
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 74 1.000 Inparanoid score I3868
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D294086at33208
OrthoFinder 1 1.000 - - FOG0001808
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.970

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