DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sp212 and CG32260

DIOPT Version :9

Sequence 1:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:536 Identity:147/536 - (27%)
Similarity:215/536 - (40%) Gaps:129/536 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIAL-AGAQLVPENSCPDYFRYVNDAFQGVQGE-------ITLPSLMRGRNRIDIRFSQRGEQDA 67
            |:.| .||:.:|...|.|..:..|.......|.       :.:| |..||.|...|..|..:...
  Fly   135 LVCLTGGARPLPNCPCIDPRQQQNSPLLSSTGPQIGSDMMVFMP-LNSGRRRRRRRRPQSCQDAR 198

  Fly    68 SAVGSLIPYPDENAVRQLTGSAKFRIAVRPNSSNGLPKLTRLSYNEQILCSASEYRPPNSFFNRF 132
            |..||.:|         ||               ..|:|.:            ||:...:.|:.|
  Fly   199 SRPGSCLP---------LT---------------SCPQLMQ------------EYQGQANEFHTF 227

  Fly   133 YELDISGSLASFPSSVFNPFTRDGLDVNVQTVFYPTSSRGNDIWRGFTQPWTTVSNRSPAVVTPA 197
                :..|:..|..|.|             .|...|...||            ..:|....||.|
  Fly   228 ----LGQSICGFDGSTF-------------MVCCATDRSGN------------ARSRKDVFVTTA 263

  Fly   198 PTPTEIFWNQPV----PSVPITFAPPVP-TITSSPAPAPPPPPPLPTPPAVVTVPPATPPPQRFD 257
             .|...|...|:    .:.|:.|.|..| :...||:..||||||          ||...|.:   
  Fly   264 -APFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPP----------PPNNAPRE--- 314

  Fly   258 PRSQISSVVCGREGSTTPFIVRGNEFPRGQYPWLSAV-YHKE--VRALAFKCRGSLISSSIVISA 319
                  |..||..|:|:..:|.|.|..:|.|||::|: |.:|  ..||.|.|.||||.|..||::
  Fly   315 ------SATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITS 373

  Fly   320 AHCVHRMTEDRVVVGLGRYDLDDYGEDGAEMRNVMRLLWHPDYNTRSYSDADIALITIERPVTFN 384
            |||::.|.   .:|.||.:||....|.||....:.|.:.|..::..|.|: |||||.:.......
  Fly   374 AHCINPML---TLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISN-DIALIELNVVGALP 434

  Fly   385 DIIAPICMWTVEASR-----TVSTTGFIAGWGRDEDSSRT-QYPRVVEAEIASPTVCASTWRG-- 441
            ..|:|||:  .||::     .|....|:||||..:....| |..|..:..|.|...|..:::.  
  Fly   435 GNISPICL--PEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIF 497

  Fly   442 --TMVTERSLCAGNRDGSGPCVGDSGGGLMVKQGD----RWLLRGIVSAGERGPAGTCQLNQYV- 499
              ...:::.||||: .....|.|||||.||:.|.:    |:.|.|:||.|..     |....:. 
  Fly   498 QFVQFSDKVLCAGS-SSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYE-----CARPNFPG 556

  Fly   500 LYCDLSKHINWISENI 515
            :|..::.::.||.::|
  Fly   557 VYTRVASYVPWIKKHI 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sp212NP_996209.2 GD_N 23..122 CDD:292649 19/105 (18%)
Tryp_SPc 277..514 CDD:238113 83/254 (33%)
Tryp_SPc 277..511 CDD:214473 81/251 (32%)
CG32260NP_728942.1 CLIP 194..244 CDD:288855 17/102 (17%)
Tryp_SPc 327..568 CDD:214473 81/252 (32%)
Tryp_SPc 328..571 CDD:238113 83/254 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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