DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer1 and MSC

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_005089.2 Gene:MSC / 9242 HGNCID:7321 Length:206 Species:Homo sapiens


Alignment Length:148 Identity:43/148 - (29%)
Similarity:70/148 - (47%) Gaps:29/148 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EGSQATNASTSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSR------------- 70
            |.|.|:.:..||::       ..:.|.|::..:.|.....|.     |...|             
Human    35 ERSYASPSDNSSAE-------EEDPDGEEERCALGTAGSAEG-----CKRKRPRVAGGGGAGGSA 87

  Fly    71 ----RSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLA 131
                :...|.:...|.....||.|||.|||.||:.:::||..|:|.:|.:|.:.:|||:|||:||
Human    88 GGGGKKPLPAKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLA 152

  Fly   132 ISYITFLSEMVKKDKNGN 149
            .|||..|.:::::|:..|
Human   153 SSYIAHLRQLLQEDRYEN 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 24/51 (47%)
MSCNP_005089.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115 18/91 (20%)
Nuclear localization signal. /evidence=ECO:0000255 71..76 1/4 (25%)
bHLH_TS_musculin 105..170 CDD:381546 29/64 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.