DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer1 and Twist2

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_067723.1 Gene:Twist2 / 59327 RGDID:621286 Length:160 Species:Rattus norvegicus


Alignment Length:130 Identity:51/130 - (39%)
Similarity:67/130 - (51%) Gaps:18/130 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKP---------RRLKCASQMAQ------ 86
            :|.||......|:..:. ..:.|...|.|....|.|.|.         :|.|..|..||      
  Rat     2 EEGSSSPVSPVDSLGTS-EEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFEELQ 65

  Fly    87 -QRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNE 150
             ||..||:|||:|.||:||||..||..|||||.:| |||:.|||||..||.||.::::.|:..|:
  Rat    66 SQRILANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDEMDNK 129

  Fly   151  150
              Rat   130  129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 34/54 (63%)
Twist2NP_067723.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 15/61 (25%)
bHLH_TS_TWIST2 51..132 CDD:381543 40/80 (50%)

Return to query results.
Submit another query.