DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Hand1

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_067603.1 Gene:Hand1 / 59112 RGDID:621206 Length:216 Species:Rattus norvegicus


Alignment Length:131 Identity:41/131 - (31%)
Similarity:66/131 - (50%) Gaps:23/131 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PFSRRSHKPRRLKC-ASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKL 130
            |.:|.|..|.||:. ..::.:::.:...:||||.:|||.||..||..||.:|.:.:|||:.||:|
  Rat    74 PDARPSQSPGRLEALGGRLPRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRL 138

  Fly   131 AISYITFLSEMVKKDKNGNEP-----------GLSLQRNYQKEP-----------PKKIILKDRT 173
            |.|||.:|.:::.||....:|           |....:..::.|           |.:..:|.||
  Rat   139 ATSYIAYLMDVLAKDAQAGDPEAFKAELKKTDGGRESKRKRESPQQHEGLPPALGPSEKRIKGRT 203

  Fly   174 G 174
            |
  Rat   204 G 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 25/51 (49%)
Hand1NP_067603.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..109 10/34 (29%)
HLH 103..152 CDD:197674 25/48 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..203 4/37 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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