DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and hand2

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_571701.3 Gene:hand2 / 58150 ZFINID:ZDB-GENE-000511-1 Length:205 Species:Danio rerio


Alignment Length:208 Identity:59/208 - (28%)
Similarity:82/208 - (39%) Gaps:60/208 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DNFDLEATMARH----FFEGSQATNASTSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTF 65
            |.:...|....|    :|.|...::...|..||.....:|.|       ||:|            
Zfish    16 DGYSFAAASRCHEEPPYFHGWLISHPEMSPPDYTMAPSYSPE-------YSTG------------ 61

  Fly    66 CPFSRRSH------------KPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPY 118
            .|....||            .||.:|       :|..||.:||||.||||.||..||..||.:|.
Zfish    62 APGLDHSHYGGVPGAGAVGMGPRTVK-------RRPTANRKERRRTQSINSAFAELRECIPNVPA 119

  Fly   119 EKRLSKVDTLKLAISYITFLSEMVKKDKNGNEP---GLSLQRNYQKEPPKKIILKD--------- 171
            :.:|||:.||:||.|||.:|.:::.||:...|.   ....::...||..:|..:.|         
Zfish   120 DTKLSKIKTLRLATSYIAYLMDILDKDEQNGETEAFKAEFKKTDAKEERRKKEMNDVLKSSGSSN 184

  Fly   172 ------RTGGVAH 178
                  |||...|
Zfish   185 DKKTKGRTGWPQH 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 29/54 (54%)
hand2NP_571701.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 76..103 11/33 (33%)
bHLH_TS_HAND2 88..149 CDD:381477 31/60 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..194 6/35 (17%)

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