DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and mespba

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_571627.1 Gene:mespba / 58070 ZFINID:ZDB-GENE-000406-9 Length:236 Species:Danio rerio


Alignment Length:144 Identity:43/144 - (29%)
Similarity:71/144 - (49%) Gaps:24/144 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 STSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSRR------SHKPRRLKCASQMA 85
            |:|||:..|....|.|:...|.::|.        ..:|..|.|:.      ..|.|||:..:. :
Zfish    10 SSSSSESEFSSISSPETTSPDQSFSP--------PHQTKPPCSKLVKSSNIMRKKRRLRLKNP-S 65

  Fly    86 QQRQAANLRERRRMQSINEAFEGLRTHIP--TLPYEKRLSKVDTLKLAISYITFLS-------EM 141
            ::||.|:.:|:.||:.:.:|...||:.:|  ..|..:.|:|::||:|.|.||:|||       |.
Zfish    66 ERRQNASEKEKLRMRDLTKALHHLRSFLPASVAPVGQTLTKIETLRLTIQYISFLSSQLGLSEEE 130

  Fly   142 VKKDKNGNEPGLSL 155
            :...:..|..|.||
Zfish   131 LSYRRQENSSGCSL 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 20/60 (33%)
mespbaNP_571627.1 HLH 67..120 CDD:278439 19/52 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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