DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and mespaa

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_571626.1 Gene:mespaa / 58069 ZFINID:ZDB-GENE-000406-8 Length:223 Species:Danio rerio


Alignment Length:149 Identity:43/149 - (28%)
Similarity:71/149 - (47%) Gaps:14/149 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MD--NFDLEATMARHFFEGSQATNASTSSSDYFFGDEHSSESDDEDD------AYSSGFNSDQEN 60
            ||  .|.|:......|...||..:.:.|.:.|:......|.:...|.      |||.......::
Zfish     1 MDASTFSLQLQNCSFFLPDSQNQSFAVSDAGYYSATGSLSPTSSIDSCSFSPPAYSLLPQIFPKS 65

  Fly    61 TEKTFCPFSRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIP--TLPYEKRLS 123
            .:||.....:|:.:|:    :.....:||.|:.||:.||:.:.:|...|||.:|  ..|..|.|:
Zfish    66 IQKTDVQPPKRTGRPK----SKFPGVKRQTASEREKLRMRDLTKALHHLRTFLPASVAPVGKTLT 126

  Fly   124 KVDTLKLAISYITFLSEMV 142
            |::||:|||.||:.||:.:
Zfish   127 KIETLRLAIQYISCLSDQL 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 25/56 (45%)
mespaaNP_571626.1 bHLH_SF 88..152 CDD:469605 25/58 (43%)

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