DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and atoh8

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001073460.2 Gene:atoh8 / 561606 ZFINID:ZDB-GENE-061215-7 Length:266 Species:Danio rerio


Alignment Length:116 Identity:35/116 - (30%)
Similarity:55/116 - (47%) Gaps:20/116 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SRRSHKPRR-----------LKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRL 122
            |.|:..||:           :|...|  .:|..||.|||.|:.:|:.|||.||..:|...|.::|
Zfish   149 SERAESPRKRAGEPSGVVTEIKAIQQ--TRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKL 211

  Fly   123 SKVDTLKLAISYITFLSEMVKKDKNGNEPGLSLQ-------RNYQKEPPKK 166
            ||:..|::|.:||..|:::...|...:...:|.:       |..|.|...|
Zfish   212 SKLAILRIACNYILSLAQLADLDYTPDHRNMSFRECVEQCTRTLQAEGRSK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 23/54 (43%)
atoh8NP_001073460.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..164 4/14 (29%)
bHLH_TS_ATOH8 169..236 CDD:381427 26/68 (38%)
Basic motif, degenerate. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 175..188 6/12 (50%)
Helix-loop-helix motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU00981 189..227 15/37 (41%)

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