DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and twist1

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_989415.1 Gene:twist1 / 395054 XenbaseID:XB-GENE-479802 Length:166 Species:Xenopus tropicalis


Alignment Length:132 Identity:50/132 - (37%)
Similarity:67/132 - (50%) Gaps:27/132 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EHSSESDDEDDAYSSGFNSDQE---NTEKTFCPFSRRSHK-----------PRRLKCAS------ 82
            |.||......|:.|   ||::|   ...|..|...|.:.|           .|..|.:|      
 Frog     4 EESSSPVSPVDSLS---NSEEELDRQHSKRGCRKKRSTRKSPEDPDSPISVKRNKKSSSTGSSPQ 65

  Fly    83 ---QMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKK 144
               ::..||..||:|||:|.||:||||..||..|||||.:| |||:.|||||..||.||.::::.
 Frog    66 SFEELQSQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLASRYIDFLCQVLQS 129

  Fly   145 DK 146
            |:
 Frog   130 DE 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 34/54 (63%)
twist1NP_989415.1 bHLH_SF 67..138 CDD:469605 35/66 (53%)

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