DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and twi

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001033967.1 Gene:twi / 37655 FlyBaseID:FBgn0003900 Length:490 Species:Drosophila melanogaster


Alignment Length:197 Identity:65/197 - (32%)
Similarity:85/197 - (43%) Gaps:30/197 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SMDNFDLEATMARHFFEGSQATNASTSSSDYFFG--------DEHSSES-DDEDDAYSSGFNSDQ 58
            |.|..|:|  .|||        ||.:|.||...|        |:.|:.| .|..||....|..  
  Fly   290 SSDRDDME--YARH--------NALSSVSDLNGGVMSPACLADDGSAGSLLDGSDAGGKAFRK-- 342

  Fly    59 ENTEKTFCPFSRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLS 123
                    |..|...||.:.:...:.:.||..||:|||:|.||:|:||:.|:..|||||.:| ||
  Fly   343 --------PRRRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDK-LS 398

  Fly   124 KVDTLKLAISYITFLSEMVKKDKNGNEPGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDR 188
            |:.|||||..||.||..|:..........|..|.:.........:|.....|....|...||.:.
  Fly   399 KIQTLKLATRYIDFLCRMLSSSDISLLKALEAQGSPSAYGSASSLLSAAANGAEADLKCLRKANG 463

  Fly   189 YP 190
            .|
  Fly   464 AP 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 30/51 (59%)
twiNP_001033967.1 HLH 363..413 CDD:278439 30/50 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452821
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23349
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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