DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Ferd3l

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001102450.1 Gene:Ferd3l / 366598 RGDID:1311812 Length:166 Species:Rattus norvegicus


Alignment Length:78 Identity:38/78 - (48%)
Similarity:60/78 - (76%) Gaps:4/78 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 KPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFL 138
            :|:|.:..:.  .||||||:|||:||.::||||:.||..:||..||||||:::||:|||.||:|:
  Rat    91 RPKRKRVITY--AQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFM 153

  Fly   139 SEMV--KKDKNGN 149
            :|::  |::|..:
  Rat   154 TELLQSKEEKEAS 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 34/54 (63%)
Ferd3lNP_001102450.1 bHLH_TS_FERD3L_NATO3 94..157 CDD:381421 35/64 (55%)

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