DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and olig4

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_955808.1 Gene:olig4 / 324857 ZFINID:ZDB-GENE-030131-3580 Length:244 Species:Danio rerio


Alignment Length:212 Identity:54/212 - (25%)
Similarity:78/212 - (36%) Gaps:72/212 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SESDDEDDAYSSGFNSD----------QENTEK---------TFCPFSRRSHKPRRLKCASQMAQ 86
            |.|...|....|||.|:          |:.:||         |....|:...:..|||       
Zfish    10 SRSSSPDLTVDSGFFSNKMFQAYGETVQQKSEKGLQNAGKTRTRADLSKDDLQDLRLK------- 67

  Fly    87 QRQAANLRERRRMQSINEAFEGLRTHIPTL--PYEKRLSKVDTLKLAISYITFLSEMVKKDKN-- 147
                .|.|||:||..:|:|.:|||..:|..  |..::|||:.||.||.:||..||..:::.|.  
Zfish    68 ----VNSRERKRMHDLNQAMDGLREVMPYAQGPSVRKLSKISTLLLARNYILMLSSSLEEMKKLV 128

  Fly   148 GNEPGLSLQRNYQKE--PPKKII----------------LKDRTGGVAHSLSWYRKGDRYPGSKL 194
            |:..|.:.|.:..:.  ||....                |...|..|:|:               
Zfish   129 GDVYGANAQSHSARRVLPPTSAAPATQLPLLSLAPSLHPLVGSTSAVSHT--------------- 178

  Fly   195 YARTWTPEDPRGPHSQP 211
                 |....:.|||.|
Zfish   179 -----TTNGAQTPHSPP 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 24/56 (43%)
olig4NP_955808.1 bHLH_TS_OLIG2_like 64..126 CDD:381568 27/72 (38%)

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