DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and HLH4C

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster


Alignment Length:153 Identity:44/153 - (28%)
Similarity:70/153 - (45%) Gaps:38/153 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 STSSSDYFFGDE------HSSESDDEDDAYSSGFNSDQENTEKTFC-------------PFSRRS 72
            |.|.|.|:..|:      ::....:||.|.|:..:.|:....:..|             |..||.
  Fly    15 SISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDIDKRFQARMACETAAQPAPPPPPTPAPRRR 79

  Fly    73 HKP-----------------RRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEK 120
            ..|                 ||.:.|:  .:.|.|...|||.|:::.|.:|..||..:||||.:|
  Fly    80 TTPIAHLDPSELVGLSREERRRRRRAT--LKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDK 142

  Fly   121 RLSKVDTLKLAISYITFLSEMVK 143
            :|||::.|||||.||.:|:.:::
  Fly   143 KLSKIEILKLAICYIAYLNHVLE 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 24/52 (46%)
HLH4CNP_001259243.1 HLH 108..165 CDD:238036 26/56 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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