DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Lyl1

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001007678.1 Gene:Lyl1 / 304663 RGDID:1359244 Length:278 Species:Rattus norvegicus


Alignment Length:139 Identity:40/139 - (28%)
Similarity:59/139 - (42%) Gaps:25/139 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 HKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITF 137
            |:|       |...:|...|.|||.|.|.:|.||..||..:||.|.:::|||.:.|:||:.||.|
  Rat   143 HQP-------QKVARRVFTNSRERWRQQHVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGF 200

  Fly   138 LSEMVKKD-----KNGNEPGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDRYPGSKLYAR 197
            |..:::..     ...:.||      .:|.|..:.:..:...|..|.:...|.....||.     
  Rat   201 LVRLLRDQAAVLASGPSAPG------SRKPPAHRGVEGNARCGAGHRVEAARSQPVLPGD----- 254

  Fly   198 TWTPEDPRG 206
              ...||.|
  Rat   255 --CDGDPNG 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 25/54 (46%)
Lyl1NP_001007678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
bHLH_TS_LYL1 145..209 CDD:381548 27/70 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..278 12/62 (19%)
Blue background indicates that the domain is not in the aligned region.

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