DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer1 and ascl1a

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_571294.1 Gene:ascl1a / 30466 ZFINID:ZDB-GENE-980526-90 Length:196 Species:Danio rerio


Alignment Length:167 Identity:41/167 - (24%)
Similarity:67/167 - (40%) Gaps:40/167 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 RRSHKPRRLKCASQM----------AQQRQAA---NLRERRRMQSINEAFEGLRTHIPTLPYEKR 121
            :||..|..|:|..::          .||..|.   |.|||.|::.:|..|..||.|:|.....|:
Zfish    49 QRSSSPELLRCKRRLNFAGFGYSLPQQQPHAVARRNERERNRVKLVNNGFATLREHVPNGAANKK 113

  Fly   122 LSKVDTLKLAISYITFLSEMVKKD---KNGNEPGL---SLQRNYQKEPPKKIILKDRTGGVAHSL 180
            :|||:||:.|:.||..|.:::.:.   ....:.|:   ::.:||..:      :....|....| 
Zfish   114 MSKVETLRSAVEYIRALQQLLDEHDAVSAAFQSGVLSPTISQNYSND------MNSMAGSPVSS- 171

  Fly   181 SWYRKGDRYPGSKLYARTWTPEDPRGPHSQPLPLYNN 217
                          |:......||..|..|.|..:.|
Zfish   172 --------------YSSDEGSYDPLSPEEQELLDFTN 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 23/57 (40%)
ascl1aNP_571294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..54 2/4 (50%)
bHLH_TS_ASCL1_Mash1 75..145 CDD:381585 24/69 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..186 6/47 (13%)

Return to query results.
Submit another query.