DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Olig2

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001094027.1 Gene:Olig2 / 304103 RGDID:1307098 Length:323 Species:Rattus norvegicus


Alignment Length:274 Identity:66/274 - (24%)
Similarity:97/274 - (35%) Gaps:62/274 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ATNASTSSSDYFFGDEHSSESDDEDDAYSS--------------------GFNSDQENT-EKTFC 66
            |.:...|||.:..|...||...|.....||                    ||.|...:| ..|..
  Rat    24 ARSKGGSSSGFTGGTVSSSTPSDCPPELSSELRGAMGTAGAHPGDKLGGGGFKSSSSSTSSSTSS 88

  Fly    67 PFSRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTL--PYEKRLSKVDTLK 129
            ..:..:.|.::.....::.|.|...|.|||:||..:|.|.:|||..:|..  |..::|||:.||.
  Rat    89 AATSSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLL 153

  Fly   130 LAISYITFLSEMVKKDK-------NGNEPGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGD 187
            ||.:||..|:..:::.|       .|:..|..               ....||:|||.. .....
  Rat   154 LARNYILMLTNSLEEMKRLVSEIYGGHHAGFH---------------PSACGGLAHSTP-LPTAT 202

  Fly   188 RYPGSKLYARTWTPEDPRGPHSQPLPLYNNSNSNQNQNSNQSSDDFSGSGAD-----------MS 241
            .:|.:..:|    ...| ..|...||....:.:.....:..||....|||..           :.
  Rat   203 AHPAAAAHA----AHHP-AVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLSSVGSIRPPHGLLK 262

  Fly   242 DPGAAASIFSSGSG 255
            .|.|||:....|.|
  Rat   263 SPSAAAAAPLGGGG 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 24/56 (43%)
Olig2NP_001094027.1 bHLH_TS_OLIG2 95..179 CDD:381510 27/83 (33%)

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