DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and atoh1a

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_571166.2 Gene:atoh1a / 30303 ZFINID:ZDB-GENE-990415-17 Length:292 Species:Danio rerio


Alignment Length:239 Identity:60/239 - (25%)
Similarity:92/239 - (38%) Gaps:61/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HSSESDDEDDAYSSGFNSDQENTEKT--FCPF-------SRRSHKPRRLKCASQMAQQRQAANLR 94
            ||..|..|..:.:|.|....::..|.  .|..       ..|...|..........|:|.|||.|
Zfish    62 HSPGSSAEGVSSASNFRKSSKSPVKVRELCRLKGAVGADEGRQRAPSSKSTNVVQKQRRMAANAR 126

  Fly    95 ERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNEPGLSLQRNY 159
            |||||..:|.||:.||:.||....:|:|||.:||::|..||..||::::      .||.      
Zfish   127 ERRRMHGLNHAFDELRSVIPAFDNDKKLSKYETLQMAQIYINALSDLLQ------GPGA------ 179

  Fly   160 QKEPPK------KIILKDRTGGVAHSLSWYRKGDRYP--------------------GSKLYART 198
            :.:||.      .::..||:...:..:.....|..||                    |:......
Zfish   180 KADPPNCDLLHANVLETDRSPRGSPGVCRRGTGVGYPYQYEDGTFNSFMEQDLQSPSGTSKSGSE 244

  Fly   199 WTPEDPR--------GPHSQPLPLYNNSNSNQNQNSNQSSDDFS 234
            .:.:.||        .|||      :.|:|::.....||.|:.|
Zfish   245 ASKDSPRSNRSDGEFSPHS------HFSDSDETHLELQSEDELS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 28/54 (52%)
atoh1aNP_571166.2 bHLH_TS_ATOH1 114..177 CDD:381556 29/68 (43%)

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