DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer1 and tcf15

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_571047.1 Gene:tcf15 / 30159 ZFINID:ZDB-GENE-980605-20 Length:183 Species:Danio rerio


Alignment Length:167 Identity:54/167 - (32%)
Similarity:79/167 - (47%) Gaps:38/167 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLKCASQ--MAQQRQAANLRERRRMQSI 102
            |..|:||::...|..:|:|   ....||.:.:..:..|......  :.:||.|||.|||.|.||:
Zfish    19 SMMSEDEENRSESDGSSEQ---SYGCCPSAEKRRRMSRKTTVGSVVIVKQRNAANARERDRTQSV 80

  Fly   103 NEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMV-------------------KKDKNG 148
            |.||..|||.|||.|.:::|||::||:||.|||:.|:.::                   :.|..|
Zfish    81 NTAFTALRTLIPTEPVDRKLSKIETLRLASSYISHLANVLLIGDGGEDAHPCVSAVYSAQGDSGG 145

  Fly   149 NEPG------LSLQRNYQKEPPKKIILKD--RTGGVA 177
            .:|.      .|.||...|:      |.|  |..|:|
Zfish   146 KQPRTICIFCFSTQRKGIKD------LTDCVRMRGIA 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 28/70 (40%)
tcf15NP_571047.1 HLH 65..116 CDD:278439 31/50 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.