DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Neurog1

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_062080.1 Gene:Neurog1 / 29410 RGDID:3167 Length:244 Species:Rattus norvegicus


Alignment Length:245 Identity:64/245 - (26%)
Similarity:107/245 - (43%) Gaps:57/245 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ASTSSSDYFFGDEHSSESDDEDD-------AYSSGFNSDQENTEKTFCPFS-----------RRS 72
            ||::|     |.:.||...||:|       |.:||.:.....:..|....|           ||.
  Rat    15 ASSNS-----GSDLSSFLTDEEDCARLQPLASTSGLSVPARRSAPTLSGASNVPGGQDEEQERRR 74

  Fly    73 HKPR-RLKCASQMAQQRQA----ANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAI 132
            .:.| |::..:.:...|::    ||.|||.||.::|.|.:.||:.:|:.|.:.:|:|::||:.|.
  Rat    75 RRGRARVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAY 139

  Fly   133 SYITFLSEMVKKDKNGNEPGLSLQRNYQKEPPKKI-ILKDRTGGVAHSLSWYRKGDRYPGSKLYA 196
            :||..|:|.::....|...|.:.:|..   ||:.: .|.......:.:.||        ||...|
  Rat   140 NYIWALAETLRLADQGLPGGGARERLL---PPQCVPCLPGPPSPASDTESW--------GSGAAA 193

  Fly   197 RTWTPEDPRGPHSQPLPLYNNSNSNQNQNSNQSSDDFS-GSGADM-SDPG 244
                  .|....:.||         .:.:|..:|:||: |.|..: |.||
  Rat   194 ------SPCATVASPL---------SDPSSPSASEDFTYGPGGPLFSFPG 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 23/58 (40%)
Neurog1NP_062080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..84 8/40 (20%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 23/70 (33%)

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