DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Olig3

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001099739.1 Gene:Olig3 / 293012 RGDID:1305997 Length:273 Species:Rattus norvegicus


Alignment Length:145 Identity:40/145 - (27%)
Similarity:63/145 - (43%) Gaps:17/145 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MDNFDLEATMARHFFEGSQATNASTSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTFCPF 68
            ||...|.....||.....::...|.||:......:...||.....|.::|.:|            
  Rat    17 MDEMYLRDHHHRHHHHHQESRLNSVSSTQGDMVQKMPGESLSRAGAKAAGESS------------ 69

  Fly    69 SRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTL--PYEKRLSKVDTLKLA 131
               .:|.::......:.|.|...|.|||:||..:|.|.:|||..:|..  |..::|||:.||.||
  Rat    70 ---KYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLA 131

  Fly   132 ISYITFLSEMVKKDK 146
            .:||..|:..:::.|
  Rat   132 RNYILMLTSSLEEMK 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 24/56 (43%)
Olig3NP_001099739.1 bHLH_TS_OLIG3 70..150 CDD:381511 27/77 (35%)

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