Protein Alignment Fer1 and Neurod4

DIOPT Version :10

• Sequence 1: NP_001262334.1
• Gene: Fer1 / 2768661
• FlyBaseID: FBgn0037475
• Length: 256
• Species: Drosophila melanogaster
• Sequence 2: NP_001099412.2
• Gene: Neurod4 / 288821
• RGDID: 1310434
• Length: 330
• Species: Rattus norvegicus
• Alignment Length: 231
• Identity: 58/231 - (25%)
• Similarity: 96/231 - (41%)
• Gaps: 57/231 - (24%)

  Fly    37 DEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLKCA--SQMAQQRQAANLRERRRM 99
            :||.|..::|:         ::|:.:|.    .||..|.:::..|  .:...:|..||.|||.||
  Rat    49 EEHDSIEEEEE---------EEEDGDKP----KRRGPKKKKMTKARLERFRARRVKANARERTRM 100

  Fly   100 QSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKD-------------KNGNEP 151
            ..:|:|.:.||..:|.....::|||::||:||.:||..|||:::..             |..::|
  Rat   101 HGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTLEGKGFVEMLCKGLSQP 165

  Fly   152 GLSLQRNYQKEPPKKIILK---------DRTGGVAHSLSWYRKGDRYPGSKLYARTWTPEDPRGP 207
            ..:|.....:..|:..:|:         |.|..| ||.::...|             .|..|.|
  Rat   166 TSNLVAGCLQLGPQSALLEKREEKSPICDSTVSV-HSFNYQSPG-------------LPSPPYG- 215

  Fly   208 HSQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDP 243
            |.:..||:     .:.|......|.|.....|.|.|
  Rat   216 HMETHPLH-----LKPQPFKSLGDSFGSHPPDCSTP 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Fer1	NP_001262334.1	bHLH_TS_PTF1A	87..142	CDD:381423	25/54 (46%)
Neurod4	NP_001099412.2	bHLH_TS_NeuroD4_ATOH3	59..145	CDD:381564	31/98 (32%)
		Neuro_bHLH	146..263	CDD:463621	23/121 (19%)