DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Tcf21

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001027569.1 Gene:Tcf21 / 252856 RGDID:620523 Length:179 Species:Rattus norvegicus


Alignment Length:120 Identity:44/120 - (36%)
Similarity:67/120 - (55%) Gaps:13/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 FGDEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLKCASQMAQ-----QRQAANLR 94
            ||.  |:||.:|      |.|.:..:.:|......:|...|.:....|.::|     ||.|||.|
  Rat    31 FGT--SNESTEE------GSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQVQRNAANAR 87

  Fly    95 ERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGN 149
            ||.||:.:::||..|:|.:|.:|.:.:|||:|||:||.|||..|.:::..||..|
  Rat    88 ERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDKYEN 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 28/54 (52%)
Tcf21NP_001027569.1 bHLH_TS_TCF21_capsulin 77..140 CDD:381547 29/62 (47%)

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