DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and lin-32

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_508410.2 Gene:lin-32 / 191703 WormBaseID:WBGene00003018 Length:142 Species:Caenorhabditis elegans


Alignment Length:136 Identity:48/136 - (35%)
Similarity:73/136 - (53%) Gaps:22/136 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FEGS-QATNASTSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLKCA 81
            ::|| |:|..:...|..|     |.:|.:..|:.|:|...|.:.             |.||.|..
 Worm    19 YQGSIQSTMTTPLQSPNF-----SLDSPNYPDSLSNGGGKDDKK-------------KCRRYKTP 65

  Fly    82 SQ--MAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKK 144
            |.  :..:|.|||.||||||.::|.|::.||..:|.:...|:|||.:||::|..||..||:::|:
 Worm    66 SPQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDSGKKLSKFETLQMAQKYIECLSQILKQ 130

  Fly   145 D-KNGN 149
            | ||.|
 Worm   131 DSKNEN 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 26/54 (48%)
lin-32NP_508410.2 bHLH_TS_ATOH1_like 73..128 CDD:381436 26/54 (48%)

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