DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and hlh-10

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_505401.2 Gene:hlh-10 / 191402 WormBaseID:WBGene00001954 Length:202 Species:Caenorhabditis elegans


Alignment Length:133 Identity:37/133 - (27%)
Similarity:67/133 - (50%) Gaps:5/133 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QATNASTSSSDYFFGDEHSSESDDEDDAYSSGFNSDQENTEKTFCPF--SRRSHKPRRL--KCAS 82
            |:...:::|......||.......|:|......:...:..|.|..|.  |||.....::  :...
 Worm    53 QSMLEASASQPQLTQDEPPENDTKENDLVKQNKSEVNDENESTPSPTQNSRRRTSTGKIDRRMVG 117

  Fly    83 QMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKN 147
            :|..:|..||.|||.|:|.:::.|:.||..:| :..:.::||:.|||:|.|||.:|..:::::.|
 Worm   118 KMCTRRYEANARERNRVQQLSKMFDQLRVCLP-IEDDAKISKLATLKVASSYIGYLGAILQENSN 181

  Fly   148 GNE 150
            ..|
 Worm   182 DEE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 22/54 (41%)
hlh-10NP_505401.2 bHLH_SF 121..179 CDD:469605 22/58 (38%)

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