DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and hlh-8

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_509367.1 Gene:hlh-8 / 181069 WormBaseID:WBGene00001953 Length:178 Species:Caenorhabditis elegans


Alignment Length:167 Identity:51/167 - (30%)
Similarity:71/167 - (42%) Gaps:39/167 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNE 150
            |||..||.|||:|.:.:|:||..||..||::|.:| :||:.||::|..||:||.||         
 Worm    20 QQRACANRRERQRTKELNDAFTLLRKLIPSMPSDK-MSKIHTLRIATDYISFLDEM--------- 74

  Fly   151 PGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDRY-----PGS--KLYARTWTPEDPRG-- 206
                 |:|..|.....|..:.|...:..:.:.:|..:.|     |..  .|.:....|..|..  
 Worm    75 -----QKNGCKLYGHSIFDEKRGYNLQSAFNMWRGNNGYTPIAGPSQLPPLQSAHIPPPAPSSIP 134

  Fly   207 PHS-QPLPLYNN--------------SNSNQNQNSNQ 228
            ||. .|.|.|..              |..|.|.|.||
 Worm   135 PHCLMPQPWYQTCPPPKQEFHELCPISTPNPNSNPNQ 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 27/54 (50%)
hlh-8NP_509367.1 bHLH_TS_TWIST 21..79 CDD:381470 30/72 (42%)

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