DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Nhlh2

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_848892.1 Gene:Nhlh2 / 18072 MGIID:97324 Length:135 Species:Mus musculus


Alignment Length:133 Identity:45/133 - (33%)
Similarity:65/133 - (48%) Gaps:23/133 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SSDYFFGDEH--SSESDDED----DAYSSGFNSDQENTEK-----------TFCPFSR---RSHK 74
            |.|.....:|  |:.||.|.    |....|..||.|..|:           ...|..:   |..|
Mouse     4 SPDQAADSDHPSSTHSDPESLGGADTKVLGSVSDLEPVEEADGDGKGGSRAALYPHPQQLSREEK 68

  Fly    75 PRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLS 139
            .||.:..   |:.|.|...|||.|:::.|.||..||..:||||.:|:|||::.|:|||.||::|:
Mouse    69 RRRRRAT---AKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLN 130

  Fly   140 EMV 142
            .::
Mouse   131 HVL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 26/54 (48%)
Nhlh2NP_848892.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81 20/79 (25%)
bHLH_TS_HEN2 63..135 CDD:381545 31/74 (42%)

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