DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Atoh1

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_031526.1 Gene:Atoh1 / 11921 MGIID:104654 Length:351 Species:Mus musculus


Alignment Length:255 Identity:67/255 - (26%)
Similarity:94/255 - (36%) Gaps:93/255 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 HSSE------SDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLK----------------CA 81
            ||.|      :...|:|.|.|     |...::.|....:|..|.:::                |:
Mouse    81 HSPELGASEAAAPRDEADSQG-----ELVRRSGCGGLSKSPGPVKVREQLCKLKGGVVVDELGCS 140

  Fly    82 SQMA-----------QQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYI 135
            .|.|           |:|.|||.||||||..:|.||:.||..||:...:|:|||.:||::|..||
Mouse   141 RQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQMAQIYI 205

  Fly   136 TFLSEMVKKDKNGNEPGLSLQRNYQKEPPKKIILKDRTGGVAHSL---SWYRKGDRYPGSKLYAR 197
            ..|||:::....|.:|          .||......|.     |.|   |.|..|   .|:...| 
Mouse   206 NALSELLQTPNVGEQP----------PPPTASCKNDH-----HHLRTASSYEGG---AGASAVA- 251

  Fly   198 TWTPEDPRGPHSQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFS--SGSG 255
                      .:||.|                     |.|...:.||...:.||  :.||
Mouse   252 ----------GAQPAP---------------------GGGPRPTPPGPCRTRFSGPASSG 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 29/54 (54%)
Atoh1NP_031526.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..39
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..116 6/31 (19%)
bHLH_TS_ATOH1 152..215 CDD:381556 30/62 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..278 12/68 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 308..351
Blue background indicates that the domain is not in the aligned region.

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