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Protein Alignment Fer1 and atoh1c
DIOPT Version :9
Sequence 1: | NP_001262334.1 |
Gene: | Fer1 / 2768661 |
FlyBaseID: | FBgn0037475 |
Length: | 256 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_003199618.1 |
Gene: | atoh1c / 100498672 |
ZFINID: | ZDB-GENE-090805-1 |
Length: | 204 |
Species: | Danio rerio |
Alignment Length: | 132 |
Identity: | 42/132 - (31%) |
Similarity: | 72/132 - (54%) |
Gaps: | 34/132 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 SDQENTEKTFCPFSRRSHKPRRLK-------CA----------------SQMAQQRQ----AANL 93
:|:.::|: ||.:....:..:|: || |.:|:.|: |||.
Zfish 16 TDRSHSEQ--CPKAPMGWREEQLQDRASCDPCALVQLRLTGLSYSSEEQSSIARARRRRRLAANA 78
Fly 94 RERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNE----PGLS 154
||||||..:|.||:.||:.||.:..:::|||.:||::|..||:.|||:: :||:.:. |.|:
Zfish 79 RERRRMLGLNVAFDRLRSVIPNVESDRKLSKSETLQMAQIYISTLSELL-EDKDCDPETPYPTLT 142
Fly 155 LQ 156
:|
Zfish 143 MQ 144
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer1 | NP_001262334.1 |
HLH |
92..144 |
CDD:197674 |
25/51 (49%) |
atoh1c | XP_003199618.1 |
HLH |
87..129 |
CDD:197674 |
18/42 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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