DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and ascl2

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_002940290.3 Gene:ascl2 / 100494131 XenbaseID:XB-GENE-6458615 Length:236 Species:Xenopus tropicalis


Alignment Length:95 Identity:30/95 - (31%)
Similarity:49/95 - (51%) Gaps:12/95 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SRRSHKPRRLKC---------ASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTL--PYEKRL 122
            :.:|..|:||:|         |..::...:..|.|||.|::.:|..|..||.|:|..  | .|::
 Frog    85 ANQSGSPQRLRCQRRSGSLPNAIGISATSERRNERERNRVKLVNLGFAKLRQHVPQAQGP-NKKM 148

  Fly   123 SKVDTLKLAISYITFLSEMVKKDKNGNEPG 152
            |||:||:.|:.||..|..::.:...|...|
 Frog   149 SKVETLRSAVEYIRALQSILMERTAGEGQG 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 22/56 (39%)
ascl2XP_002940290.3 bHLH_TS_ASCL2_Mash2 110..174 CDD:381586 22/64 (34%)

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