DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and atoh8

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_002937330.2 Gene:atoh8 / 100490889 XenbaseID:XB-GENE-877027 Length:246 Species:Xenopus tropicalis


Alignment Length:123 Identity:36/123 - (29%)
Similarity:56/123 - (45%) Gaps:29/123 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 SSGFNSDQENTEKTFCPFSRRSHKPRRLKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPT 115
            ::|.||:.:..::|           |||           .||.|||.|:.:|:.|||.||..:|.
 Frog   142 TAGVNSEIKAIQQT-----------RRL-----------LANARERTRVHTISAAFEALRKQVPC 184

  Fly   116 LPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNEPGLSL-------QRNYQKEPPKK 166
            ..|.::|||:..|::|.:||..|:.:...|.:.:...||.       .|..|.|...|
 Frog   185 YSYGQKLSKLAILRIACNYILSLARLADLDYSVDHSNLSFPECVEQCTRTLQSEGRSK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 22/54 (41%)
atoh8XP_002937330.2 bHLH_TS_ATOH8 149..216 CDD:381427 27/88 (31%)

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