DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and mespbb

DIOPT Version :10

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001252536.1 Gene:mespbb / 100148845 ZFINID:ZDB-GENE-110609-1 Length:244 Species:Danio rerio


Alignment Length:158 Identity:45/158 - (28%)
Similarity:75/158 - (47%) Gaps:16/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FFEGSQATNASTSSSDYFFGDEH----SSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRR 77
            ||...|..:.|:.|..|......    ||..|....|.:...:...|.:..:|....|.....||
Zfish     7 FFNYIQQNSWSSDSELYNISSPETVSPSSYMDFSPSAQAQSVSPKPEISGSSFQDGGRSRVGVRR 71

  Fly    78 LKCASQMAQQRQAANLRERRRMQSINEAFEGLRTHIP--TLPYEKRLSKVDTLKLAISYITFLSE 140
            .:|.:. ::|||:|:.:|:.||:.:.:|...|||::|  ..|..:.|:|::||:|.|.||::||.
Zfish    72 TRCKNP-SKQRQSASEKEKLRMRDLTKALHHLRTYLPPSVAPVGQTLTKIETLRLTIRYISYLSA 135

  Fly   141 MVKKDKNGNEPGLSLQRN-----YQKEP 163
            .:    ..:|..|...|:     ||:.|
Zfish   136 QL----GLSEESLCKMRDLRVSGYQEMP 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 bHLH_TS_PTF1A 87..142 CDD:381423 23/56 (41%)
mespbbNP_001252536.1 bHLH_TS_Mesp 80..144 CDD:381508 24/67 (36%)

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