DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and Tcf24

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001272354.1 Gene:Tcf24 / 100039596 MGIID:3780500 Length:166 Species:Mus musculus


Alignment Length:125 Identity:42/125 - (33%)
Similarity:67/125 - (53%) Gaps:19/125 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 AAN-LRERRRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNG-NEPG 152
            ||| .|||.|:|::..||..|:..:|::|.:.:|||:|.|.||.:||..|:..::.|.:. .:||
Mouse    51 AANAARERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSLQDDTDAPGDPG 115

  Fly   153 L-SLQRNYQKEPPKKIILKDR-----TGG-VAHSLSWYRKGDRYPGSKL-YARTWTPEDP 204
            | :|:.:....|.||..::.|     ||. :.||:|         |.|. ::.|.|...|
Mouse   116 LGALRGDGYLHPVKKWPMRSRLYIGATGQFLKHSVS---------GEKASHSNTSTASQP 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 21/52 (40%)
Tcf24NP_001272354.1 bHLH_TS_TCF24 49..104 CDD:381553 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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