DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer1 and tcf23

DIOPT Version :9

Sequence 1:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_001342593.4 Gene:tcf23 / 100002924 ZFINID:ZDB-GENE-090806-5 Length:277 Species:Danio rerio


Alignment Length:177 Identity:47/177 - (26%)
Similarity:80/177 - (45%) Gaps:30/177 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLK-------------CASQMAQQRQAANLRER 96
            |||.|:..|.:..:....:|:.....:....|..|             |.||.:.:..|   |||
Zfish   112 DEDMAWQRGEDGGKSLRTQTWNQTCVKLATQREAKKWVKSGPTASSRACKSQTSPENAA---RER 173

  Fly    97 RRMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEMVKKDKNGNEPGLS-LQRNYQ 160
            .|::::.:||..|:..:|::|.:.:|||:|.|.||.:||..|:|.:  |:.|.....| |||...
Zfish   174 SRVRNLRQAFHSLQAALPSVPPDTKLSKLDVLVLATNYIAHLTETL--DQGGMLGDQSVLQRVEY 236

  Fly   161 KEPPKKIILKD--RTGGVAHSLSWYRKGDRYPGSKLYARTWTPEDPR 205
            ..|.||..::.  ..|.:         |:|..|:::...|.:..:.|
Zfish   237 LHPVKKWPMRSLLYCGNI---------GERLTGAQVSQETASKAESR 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer1NP_001262334.1 HLH 92..144 CDD:197674 20/51 (39%)
tcf23XP_001342593.4 HLH 170..221 CDD:197674 21/55 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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